Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_B02
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 102 2e-22
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 87 1e-17
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 85 2e-17
07_01_1001 - 8460467-8460799 66 1e-11
07_03_0321 + 16757414-16757743 62 3e-10
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 33 0.100
01_06_0098 - 26416768-26416998 32 0.30
03_06_0533 + 34565062-34565439 31 0.70
06_03_1287 - 29011710-29011871,29012209-29012272,29012556-290126... 29 1.6
12_01_0090 + 717524-719080 29 2.8
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.8
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 28 5.0
11_06_0264 - 21785450-21786928 27 6.5
12_02_1217 + 27082452-27083593,27085041-27085158 27 8.7
07_03_1321 - 25794146-25794904 27 8.7
05_02_0121 - 6834843-6835127 27 8.7
03_02_0539 - 9329572-9330729,9330988-9331041 27 8.7
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 102 bits (244), Expect = 2e-22
Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGREK +S+P
Sbjct: 7 YLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVP 66
Query: 278 VGGG---XXXXXXXXXXXXXXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
GGG EE K++ K K ESDDDMGF LFD
Sbjct: 67 SGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEK--EESDDDMGFSLFD 113
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 86.6 bits (205), Expect = 1e-17
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GREK +S+P
Sbjct: 200 YLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFASVP 259
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXK-XXXKXXSESDDDMGFGLFD 415
GGG + E K + ESDDDMGF LFD
Sbjct: 260 CGGGGVAVAAAAPAAGGGAAPQSEAKKEEKVEEKEESDDDMGFSLFD 306
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 85.4 bits (202), Expect = 2e-17
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GREK +S+P
Sbjct: 7 YLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVP 66
Query: 278 VGGG-----XXXXXXXXXXXXXXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
GGG E KKED K K ESDDDMGF LFD
Sbjct: 67 SGGGGVAVAAAAPAAGGAGGAPAAEAKKED-KVEEK--EESDDDMGFSLFD 114
>07_01_1001 - 8460467-8460799
Length = 110
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLAFGG 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
VG E++KE+ K E +DD+ F LFD
Sbjct: 67 VGAAPAAAATAGGGAAAAGEKEKEE----EKVEEEEEDDIVFSLFD 108
>07_03_0321 + 16757414-16757743
Length = 109
Score = 61.7 bits (143), Expect = 3e-10
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLAF-- 64
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
G EK+E+ K K E +DD+ F LFD
Sbjct: 65 --GAAPAAAAATAGGAAAAGEKEEEEKVEEK-EKEGEDDIVFSLFD 107
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 33.5 bits (73), Expect = 0.100
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +2
Query: 215 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSESDDD 394
L + V+ LI + + PV EEKKE+ K ESDDD
Sbjct: 50 LEHRSVDDLILSVGSGGGAAPVAAAAAPAAGGGAAAAPAAEEKKEEAK------EESDDD 103
Query: 395 MGFGLFD 415
MGF LFD
Sbjct: 104 MGFSLFD 110
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 131 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 229
P V KI+ +V IEAD+ + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>03_06_0533 + 34565062-34565439
Length = 125
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 18 VQRRTLFFRHYTFRVN*DLKNALRGRAIYWLCWVARLRQLPLT-LRRSSA 164
V+RR LF R Y F + +L R R + W+ + RLR+ T LRR A
Sbjct: 30 VERRQLFLRSYHFSRDVELSPRARARRVVWV-GLRRLRRAAATGLRRLRA 78
>06_03_1287 -
29011710-29011871,29012209-29012272,29012556-29012611,
29012787-29012984
Length = 159
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 335 EEKKEDXKXXXKXXSESDDDMGFGLFD 415
EEKKE+ K ES+DD+GF LFD
Sbjct: 139 EEKKEEEK------EESEDDLGFSLFD 159
>12_01_0090 + 717524-719080
Length = 518
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 285 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIF 151
PP + S P ++ S+S SS + + ++S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 288 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPP 115
PPP I + A +S P+S+V + L+ SASA+ F+ + A +PP
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPP 1172
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 83 VTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 205
+TW +LLA K A A+V+ +LS+ I D +LKK+
Sbjct: 283 LTWSVFLLAQNPSKMRKAQAEVDSVLSNETINVD--QLKKL 321
>11_06_0264 - 21785450-21786928
Length = 492
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 288 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTE 163
PPP + + S AIS + V FL S++A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKL 196
Y+LA+ TPA +D E+ VG +AD + L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>07_03_1321 - 25794146-25794904
Length = 252
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 246 AISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 103
A+ ++S P ++ T L A A + + R +T+AAA PPS+ S
Sbjct: 157 AMMRASSSPATNTTTSLVLDALAML-AKSRAIATAAAAAAAAPPSSGS 203
>05_02_0121 - 6834843-6835127
Length = 94
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 173 IEADAEKLKKVITELNGKDVEQLIAAGREK 262
+EADA + K V+ L GKD A+ E+
Sbjct: 17 VEADAAEFKSVVQSLTGKDSTAATASPEEE 46
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 264 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTS-AAAGVVLPPSTASK*RGH 88
S + A S S+S P SS L ++ +P+ AAAG ++PPS S H
Sbjct: 150 SSAAAAGASSSSSKPSSSAARQLPGGGASPMPSAAASTQPGGAAAGAIIPPSGLSSMSHH 209
Query: 87 V 85
+
Sbjct: 210 L 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,471,893
Number of Sequences: 37544
Number of extensions: 168626
Number of successful extensions: 542
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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