Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_B02
(508 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 118 5e-27
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 118 5e-27
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 118 5e-27
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 118 6e-27
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 118 6e-27
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 39 0.004
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 39 0.004
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 39 0.004
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 38 0.010
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 38 0.010
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 38 0.010
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 38 0.010
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 37 0.014
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 33 0.22
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 33 0.22
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 31 0.90
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 31 1.2
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 31 1.2
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 31 1.2
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 3.6
AY058297-1|AAL13526.1| 543|Drosophila melanogaster GH05942p pro... 29 4.8
AE014296-1660|AAF50267.2| 543|Drosophila melanogaster CG3529-PB... 29 4.8
AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-P... 28 6.3
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 28 6.3
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 28 6.3
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 118 bits (284), Expect = 5e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSES-DDDMGFGLFD 415
VGGG +KKE K K SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 118 bits (284), Expect = 5e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSES-DDDMGFGLFD 415
VGGG +KKE K K SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 118 bits (284), Expect = 5e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSES-DDDMGFGLFD 415
VGGG +KKE K K SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 118 bits (283), Expect = 6e-27
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSES-DDDMGFGLFD 415
VGGG +KKE K K SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 118 bits (283), Expect = 6e-27
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 277
YLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 278 VGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXSES-DDDMGFGLFD 415
VGGG +KKE K K SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAVDAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +2
Query: 146 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 325
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAE 87
Query: 326 XXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
EEKK++ + +SDDDMGFGLFD
Sbjct: 88 SKKEEKKKEEES-----DQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +2
Query: 146 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 325
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAE 87
Query: 326 XXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
EEKK++ + +SDDDMGFGLFD
Sbjct: 88 SKKEEKKKEEES-----DQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +2
Query: 146 VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 325
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAE 87
Query: 326 XXXEEKKEDXKXXXKXXSESDDDMGFGLFD 415
EEKK++ + +SDDDMGFGLFD
Sbjct: 88 SKKEEKKKEEES-----DQSDDDMGFGLFD 112
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 338 EKKEDXKXXXKXXSESDDDMGFGLFD 415
EKKE+ K E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 338 EKKEDXKXXXKXXSESDDDMGFGLFD 415
EKKE+ K E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 338 EKKEDXKXXXKXXSESDDDMGFGLFD 415
EKKE+ K E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 338 EKKEDXKXXXKXXSESDDDMGFGLFD 415
EKKE+ K E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +2
Query: 200 KVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEKKEDXKXXXKXXS 379
K + +N KD+ I +G + + P GG EEKK++ +
Sbjct: 49 KALEAINVKDLITNIGSG---VGAAPAGGAAPAAAAAAPAAESKKEEKKKEEES-----D 100
Query: 380 ESDDDMGFGLFD 415
+SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -2
Query: 258 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 103
S P++ S S S+ S +F S SAS S PT T+AAAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -2
Query: 258 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 103
S P++ S S S+ S +F S SAS S PT T+AAAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2
Query: 258 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVV 124
S P++ S S S+ S +F S SAS S PT T+AAAG +
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGAL 192
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 288 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 133
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 288 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 133
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 288 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 133
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 146 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 286
V KIL G++ ++ +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
>AY058297-1|AAL13526.1| 543|Drosophila melanogaster GH05942p
protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 101 LLAVLGGKTTPAAADVEKILSSVGIEADAEK 193
L+ ++G K P AA EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135
>AE014296-1660|AAF50267.2| 543|Drosophila melanogaster CG3529-PB
protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 101 LLAVLGGKTTPAAADVEKILSSVGIEADAEK 193
L+ ++G K P AA EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135
>AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-PA
protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 252 PAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLP 118
P S +L +V TF++ + S + PT + ++ T + +V+P
Sbjct: 154 PIPTSTMATLQAQTVATFIAATGSKNRPTTIVVYPTVSPESIVIP 198
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 264 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 103
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 264 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 103
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,983,134
Number of Sequences: 53049
Number of extensions: 264162
Number of successful extensions: 787
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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