Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A23
(656 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 1.7
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 23 1.7
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 2.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 3.9
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 5.1
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 5.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 21 6.7
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -3
Query: 333 LSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSW 232
LSS H PS R + R +Y + SW
Sbjct: 286 LSSIRHPESNPSERVMRELGRIFRAYCRENHASW 319
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 121 SFCVYFRSPWGAGQRDATGTAKINRIRXRGSVGVY 225
S+ +F SP G TGT RG++G Y
Sbjct: 40 SYQHHFNSPAGNAHTGPTGTHDAGFPSPRGALGAY 74
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -2
Query: 316 YSSDTKCTHSGKSSTVALFLPKSKIRILGS 227
Y+ D CTH +++ P+S +GS
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPESPYPQIGS 394
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 308 GHQVHAQWKVVN 273
GH +HAQ VVN
Sbjct: 327 GHHIHAQHHVVN 338
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 184 KINRIRXRGSVGVYLIPRSVSSIWVRRERPLTTFH 288
K +++ G+ L+P + V RP TT+H
Sbjct: 934 KQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYH 968
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 315 IRRTPSARTVESRQRSLSSYP 253
I RTP + R+R L YP
Sbjct: 48 IMRTPEQMFLADRERGLKYYP 68
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 574 GGRHRSSRLCAVPSSSSP 627
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 574 GGRHRSSRLCAVPSSSSP 627
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 574 GGRHRSSRLCAVPSSSSP 627
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 574 GGRHRSSRLCAVPSSSSP 627
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 315 IRRTPSARTVESRQRSLSSYP 253
I RTP + R+R L YP
Sbjct: 48 IMRTPEQLFLAERERGLKYYP 68
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,377
Number of Sequences: 336
Number of extensions: 3760
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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