Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A22
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 112 4e-24
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 90 2e-17
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 84 1e-15
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 77 2e-13
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 71 1e-11
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 68 8e-11
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 67 2e-10
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 64 2e-09
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 56 3e-07
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 54 2e-06
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 49 5e-05
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 46 3e-04
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 43 0.003
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 43 0.003
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 42 0.008
UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;... 32 4.8
UniRef50_A2F5A5 Cluster: Putative uncharacterized protein; n=2; ... 31 8.5
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 112 bits (269), Expect = 4e-24
Identities = 62/123 (50%), Positives = 73/123 (59%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 226 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 405
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 406 VKA 414
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 90.2 bits (214), Expect = 2e-17
Identities = 52/123 (42%), Positives = 65/123 (52%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 226 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 405
+Q P+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 406 VKA 414
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 83.8 bits (198), Expect = 1e-15
Identities = 47/120 (39%), Positives = 61/120 (50%)
Frame = +1
Query: 52 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 231
KVK +L K + LRV K+ G +SK +I VRK+IARV V +
Sbjct: 66 KVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARVLTVIN 125
Query: 232 QKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 411
PLDLR + TRA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 126 ANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 77.0 bits (181), Expect = 2e-13
Identities = 46/121 (38%), Positives = 60/121 (49%)
Frame = +1
Query: 52 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 231
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 232 QKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 411
Q+ PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 412 A 414
A
Sbjct: 142 A 142
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 70.5 bits (165), Expect = 1e-11
Identities = 40/94 (42%), Positives = 52/94 (55%)
Frame = +1
Query: 133 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKTR 312
+LRV + TG +KLS+I VVRK IAR+ + Q+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 313 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 414
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 68.1 bits (159), Expect = 8e-11
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +1
Query: 136 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKTRA 315
LR KV+ G A KL +I +VRK IA+ V +++ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 316 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 411
+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 93 IRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 66.9 bits (156), Expect = 2e-10
Identities = 38/103 (36%), Positives = 53/103 (51%)
Frame = +1
Query: 55 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 234
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 235 KMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRK 363
K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 63.7 bits (148), Expect = 2e-09
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +1
Query: 55 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 234
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 235 KMXXXXXXXXXXXX---XXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 405
P LR K T R AL ++E KT +++R+ FP RVYA
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYA 124
Query: 406 VK 411
VK
Sbjct: 125 VK 126
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 56.0 bits (129), Expect = 3e-07
Identities = 40/121 (33%), Positives = 52/121 (42%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 226 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 405
Y+QK P +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 406 V 408
V
Sbjct: 120 V 120
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 133 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKT 309
+LR K T G V ++++ RV +K +ARV V +QK P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 310 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 411
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 48.8 bits (111), Expect = 5e-05
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +1
Query: 40 VKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVY 219
V M ++K LR ++ + LRVA+VTGG +KLS I+V R A+ Y
Sbjct: 106 VAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIKV-RTALREAY 164
Query: 220 IVYHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKI 351
+ + PLDLR KKT A+R+ LTKH+ +
Sbjct: 165 KKKKKSLL-------------PLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 46.4 bits (105), Expect = 3e-04
Identities = 37/92 (40%), Positives = 41/92 (44%)
Frame = -2
Query: 413 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 234
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 233 W*YTM*TRAIAFLTTRILDSLEATPPVTLATR 138
W T+ AIA T IL SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 286 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 414
L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 58 LHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 43.2 bits (97), Expect = 0.003
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 52 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 231
K++ S LR LR K +G V + + I+ +K +AR V
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKADLAALRQKKNSGDVGA--NDIKTAKKNLARALTVRR 59
Query: 232 QKMXXXXXXXXXXX--XXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 405
+K+ P +LR K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 60 EKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 283 PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 399
PLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 2 PLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 744
Score = 32.3 bits (70), Expect = 4.8
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 228 SPEDEGQSXKPLQKQEIQAFRFKSQEDP 311
SP+D+ QS KPL+ QEIQ +F + P
Sbjct: 480 SPKDDYQSSKPLESQEIQPQQFLKSKAP 507
>UniRef50_A2F5A5 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 343
Score = 31.5 bits (68), Expect = 8.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 159 WSCF*TVQDPCCKKSYRTCLHCVSPEDEGQSXKPLQKQE 275
W F V +R C + PEDEG +PL+K +
Sbjct: 296 WGIFFLVAPVTVYLGWRLCYALIQPEDEGSKNEPLEKND 334
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,198,945
Number of Sequences: 1657284
Number of extensions: 4886977
Number of successful extensions: 13404
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13393
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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