Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A20
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 198 2e-51
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 110 6e-25
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 97 1e-20
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 97 1e-20
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 95 3e-20
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 89 2e-18
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 84 8e-17
At5g13650.2 68418.m01585 elongation factor family protein contai... 83 1e-16
At5g13650.1 68418.m01584 elongation factor family protein contai... 83 1e-16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 80 1e-15
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 69 3e-12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 69 3e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 48 5e-06
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 35 0.038
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 35 0.038
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 35 0.038
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 35 0.038
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 35 0.038
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 35 0.051
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.12
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.47
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 0.83
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 0.83
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 0.83
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.4
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 30 1.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.9
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.5
At1g12080.2 68414.m01397 expressed protein 27 7.7
At1g12080.1 68414.m01396 expressed protein 27 7.7
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 198 bits (484), Expect = 2e-51
Identities = 106/176 (60%), Positives = 124/176 (70%)
Frame = +1
Query: 97 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 276
DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR DE +R
Sbjct: 7 DELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAER 66
Query: 277 CITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 456
ITIKST IS+++E+ + L T R+ +E +LINLIDSPGHVDFSSEVTAALR+T
Sbjct: 67 GITIKSTGISLYYEMTDESLKSFTG--ARDGNE--YLINLIDSPGHVDFSSEVTAALRIT 122
Query: 457 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTF 624
DGAL QTETVLRQA+ ERI+P+L +NKMDR Y TF
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTF 178
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 110 bits (265), Expect = 6e-25
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 127 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 300
R +RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSS 66
Query: 301 ISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 480
IS+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 67 ISLKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVD 106
Query: 481 XXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
QT VLRQA E++ P L +NK+DR
Sbjct: 107 AVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDR 138
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 1e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +1
Query: 109 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 279
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 280 ITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 459
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 460 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 1e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +1
Query: 109 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 279
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 280 ITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 459
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 460 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 95.1 bits (226), Expect = 3e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +1
Query: 109 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRC 279
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 280 ITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 459
I+IK+ +S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ D
Sbjct: 176 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLAD 220
Query: 460 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 221 GAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDR 259
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 89.4 bits (212), Expect = 2e-18
Identities = 54/148 (36%), Positives = 80/148 (54%)
Frame = +1
Query: 133 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 312
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 313 FELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 492
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Query: 493 XXXQTETVLRQAIAERIKPILFMNKMDR 576
QT A + + +NK+D+
Sbjct: 172 VQAQTVANFYLAFEANLTIVPVINKIDQ 199
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 83.8 bits (198), Expect = 8e-17
Identities = 55/148 (37%), Positives = 76/148 (51%)
Frame = +1
Query: 130 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 309
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 310 FFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 489
+ E + F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYE----------------DTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 490 XXXXQTETVLRQAIAERIKPILFMNKMD 573
QT + A+ ++ I +NK+D
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLNKID 215
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 77 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 136
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 474
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 137 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 176
Query: 475 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
QT VL++A+ ++ +NK+DR
Sbjct: 177 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 210
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 474
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 136 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 175
Query: 475 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
QT VL++A+ ++ +NK+DR
Sbjct: 176 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 209
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 79.8 bits (188), Expect = 1e-15
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +1
Query: 127 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKS 294
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITS 151
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 474
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 152 AATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICL 191
Query: 475 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
Q+ETV RQA + I F+NKMDR
Sbjct: 192 FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDR 225
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 68.5 bits (160), Expect = 3e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 279
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 280 ITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 459
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 460 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 68.5 bits (160), Expect = 3e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 279
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 280 ITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 459
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 460 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Frame = +1
Query: 106 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIT 285
RG ++K+ N+ I HVDHGK+TLT +L I + A + D +E+ R IT
Sbjct: 70 RGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGIT 129
Query: 286 IKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 465
I + + +E E + +D PGH D+ + DGA
Sbjct: 130 INTATVE--YETENRHYAH------------------VDCPGHADYVKNMITGAAQMDGA 169
Query: 466 LXXXXXXXXXXXQT-ETVLRQAIAERIKPILFMNKMDR 576
+ QT E +L ++F+NK D+
Sbjct: 170 ILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQ 207
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 35.1 bits (77), Expect = 0.038
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 468
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 35.1 bits (77), Expect = 0.038
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Frame = +1
Query: 139 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 318
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + +
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV----- 123
Query: 319 LEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 498
+ E +++ + +D PGH D+ + DG +
Sbjct: 124 -------------EYETAKRHYA--HVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPM 168
Query: 499 XQTETVLRQAIAERIKPIL-FMNKMD 573
QT+ + A + ++ F+NK+D
Sbjct: 169 PQTKEHILLARQVGVPSLVCFLNKVD 194
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.1 bits (77), Expect = 0.038
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 468
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.1 bits (77), Expect = 0.038
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 468
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.1 bits (77), Expect = 0.038
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +1
Query: 115 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 294
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 295 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 468
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 34.7 bits (76), Expect = 0.051
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +1
Query: 139 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 318
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 319 LEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 468
E ++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 397 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
+D+PGH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 142 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 243
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 373 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 552
+ G I +D+PGH FS VTD + QT + A + + +
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVV 324
Query: 553 LFMNKMDR 576
+ +NK D+
Sbjct: 325 VAINKCDK 332
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 142 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 234
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 515 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 417
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 515 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 417
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 451 VTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 576
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 152 SPTSITASQPSRTRWFPRPVSLLVRE 229
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 537 LGNSLTQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREIN 415
L N + C S Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 388 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 567
I +ID+PGH F++ + + D A+ QT L +K I+ +NK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNK 617
Query: 568 MDR 576
+DR
Sbjct: 618 VDR 620
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 152 SPTSITASQPSRTRWFPRPVSLLVRE 229
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 506 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 414
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 506 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 414
V T TP + +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,525
Number of Sequences: 28952
Number of extensions: 240837
Number of successful extensions: 818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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