Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A19
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-8|CAB07619.1| 160|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 31 0.71
AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine re... 30 1.6
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 5.0
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 5.0
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 5.0
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical p... 28 6.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66567-8|CAA91494.1| 402|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66561-9|CAA91462.1| 402|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z93382-8|CAB07619.1| 160|Caenorhabditis elegans Hypothetical
protein F45G2.10 protein.
Length = 160
Score = 126 bits (304), Expect = 1e-29
Identities = 63/144 (43%), Positives = 92/144 (63%)
Frame = +1
Query: 88 AKPAYMDKSATLQELGYKDENELRETIYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPT 267
+KP + + T ++ +D + E I+D +R I DPE P TLE L VV EE +K
Sbjct: 16 SKPRHRPVTGTERDESVEDPIDSWE-IFDLIRDINDPEHPYTLEQLNVVQEE--LIKVFI 72
Query: 268 ADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTEXEINKQ 447
++ ++V + PT+PHCS+ATLIGL IR+K+LRS+H VK+ + I G+H+TE IN+Q
Sbjct: 73 DEEETFVKVNFTPTIPHCSMATLIGLAIRVKLLRSLHPKVKVSVSITPGSHSTEESINRQ 132
Query: 448 INDXERIAAAMENPNLRNLXENCI 519
+ D ER+AAAMEN L + C+
Sbjct: 133 LADKERVAAAMENQGLMHAVNECL 156
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/88 (28%), Positives = 36/88 (40%)
Frame = +1
Query: 82 EVAKPAYMDKSATLQELGYKDENELRETIYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKE 261
EV P +DKS L+E +DE E YL LE++K YE+ E
Sbjct: 89 EVEIPCILDKSQYLEESSLEDEMREIEQNKSYLDDPLTKILKKELEEIK-NYEDFQVRNE 147
Query: 262 PTADKVPVLRVEYNPTVPHCSLATLIGL 345
D + + + Y P P S+ + L
Sbjct: 148 QVLDNIIIKKPLYRPIQPEQSIPKVSSL 175
>AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein77 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -2
Query: 258 LHKDSFLVHDLQVFKRIWLFGVSNCPQIVIYCLSQLILVFVAELL*CSTFVHIC 97
L ++ L++ +V+ + +L SN P V+Y SQ ++F+ L ++F +C
Sbjct: 157 LSREDALIYIKKVYPKGYL-QFSNLPNFVVYMKSQNTIIFLVTLFFAASFGFLC 209
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +1
Query: 109 KSATLQELGYKDENELRETIYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPTADKVPVL 288
+S T+ +G D + +T+ +LR ++DP P T +++ ++ +P ++ +
Sbjct: 475 RSKTVPNVGLHDVEVITDTLKRFLRDLKDPLIPRTSRQ-ELIVAANLYSTDPDNGRLALN 533
Query: 289 RV 294
RV
Sbjct: 534 RV 535
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 100 YMDKSATLQELGYKDENELRETI---YDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPTA 270
+ K L + YKD N+ Y+ + ++ E T+E+L+ + G++ E
Sbjct: 156 FYGKLECLNKEEYKDINKTNTVWNKNYNKFCSFKEEEIHGTIEELQKMLNNGLYTDEFVF 215
Query: 271 DKVPVLRVE 297
DK P + V+
Sbjct: 216 DKTPFITVD 224
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 418 HTTEXEINKQINDXERIAAAMENPNLRNLXENCI 519
HT I KQI + + A A+ENP ++ E+ +
Sbjct: 915 HTVRLYITKQIENIKNSAVAIENPEANDVVESLL 948
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 418 HTTEXEINKQINDXERIAAAMENPNLRNLXENCI 519
HT I KQI + + A A+ENP ++ E+ +
Sbjct: 915 HTVRLYITKQIENIKNSAVAIENPEANDVVESLL 948
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 418 HTTEXEINKQINDXERIAAAMENPNLRNLXENCI 519
HT I KQI + + A A+ENP ++ E+ +
Sbjct: 937 HTVRLYITKQIENIKNSAVAIENPEANDVVESLL 970
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 76 PVEVAKPAYMDKSAT-LQELGYKDENELRETIYDYLRTIRDPEKPN 210
PV VAK AYM+K+ T L + + E + TI P++ N
Sbjct: 334 PVSVAKKAYMNKNITPLHTAAISNSTHMLEAMRAVYPTINIPDQDN 379
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 76 PVEVAKPAYMDKSAT-LQELGYKDENELRETIYDYLRTIRDPEKPN 210
PV VAK AYM+K+ T L + + E + TI P++ N
Sbjct: 334 PVSVAKKAYMNKNITPLHTAAISNSTHMLEAMRAVYPTINIPDQDN 379
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 76 PVEVAKPAYMDKSAT-LQELGYKDENELRETIYDYLRTIRDPEKPN 210
PV VAK AYM+K+ T L + + E + TI P++ N
Sbjct: 334 PVSVAKKAYMNKNITPLHTAAISNSTHMLEAMRAVYPTINIPDQDN 379
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -1
Query: 274 YLQLVPSQRFLPRTRPSSLQAYLAFRGLELSSNSHILSLSTHSRLCSRALVM*HFCPYMR 95
Y+ P R+ + RPS L +FR ++ +S +L ST CS FCP
Sbjct: 340 YIHSCPKMRYKAKFRPSDLLCDQSFRWVDFNSCRDLLDGST----CSNGFS--EFCP--G 391
Query: 94 A*RPPLAVLKSCL 56
A RP V+ + L
Sbjct: 392 APRPASPVVDTLL 404
>Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical
protein K07A1.9a protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -1
Query: 274 YLQLVPSQRFLPRTRPSSLQAYLAFRGLELSSNSHILSLSTHSRLCSRALVM*HFCPYMR 95
Y+ P R+ + RPS L +FR ++ +S +L ST CS FCP
Sbjct: 368 YIHSCPKMRYKAKFRPSDLLCDQSFRWVDFNSCRDLLDGST----CSNGFS--EFCP--G 419
Query: 94 A*RPPLAVLKSCL 56
A RP V+ + L
Sbjct: 420 APRPASPVVDTLL 432
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +1
Query: 208 NTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCS 324
+ + + + G+ V PT VP NP +P C+
Sbjct: 1244 SVINSVSCIISTGVTVTPPTTVVVPTTATTLNPAIPMCA 1282
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +1
Query: 208 NTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCS 324
+ + + + G+ V PT VP NP +P C+
Sbjct: 1244 SVINSVSCIISTGVTVTPPTTVVVPTTATTLNPAIPMCA 1282
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +1
Query: 208 NTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCS 324
+ + + + G+ V PT VP NP +P C+
Sbjct: 1244 SVINSVSCIISTGVTVTPPTTVVVPTTATTLNPAIPMCA 1282
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +1
Query: 208 NTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCS 324
+ + + + G+ V PT VP NP +P C+
Sbjct: 1244 SVINSVSCIISTGVTVTPPTTVVVPTTATTLNPAIPMCA 1282
>Z66567-8|CAA91494.1| 402|Caenorhabditis elegans Hypothetical
protein ZK455.6 protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 651 IXCTPLYAKNFVNFVNSFLSVIFENATSGAILENCCWVDLLLFGYAVFXQV 499
I PL+ N V S LS IF+N + +C + + GYA+F +
Sbjct: 100 ISIDPLFTPN----VASSLSAIFKNEKEDVLSTSCTILSQMTSGYAMFLNI 146
>Z66561-9|CAA91462.1| 402|Caenorhabditis elegans Hypothetical
protein ZK455.6 protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 651 IXCTPLYAKNFVNFVNSFLSVIFENATSGAILENCCWVDLLLFGYAVFXQV 499
I PL+ N V S LS IF+N + +C + + GYA+F +
Sbjct: 100 ISIDPLFTPN----VASSLSAIFKNEKEDVLSTSCTILSQMTSGYAMFLNI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,479,617
Number of Sequences: 27780
Number of extensions: 298786
Number of successful extensions: 825
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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