Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A17
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.71 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.71 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.94 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 185 CNLVFVILCIFTFIFKHILHTTNS 114
           C L FVIL   +F    +LH  N+
Sbjct: 136 CELFFVILLWISFFLNFMLHCNNT 159


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 170 VILCIFTFIFKHILHTTNSIFLI 102
           ++LC++ F +  I+ T + +FL+
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLFLL 131



 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 176 VFVILCIFTFIFKHILHTTNSIFLI 102
           +F +LCI+ F    I+ T + +FL+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLL 164


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = +1

Query: 43  TYVNDLFLFTNNLDSNSLKSIKKMEFVVCRICLKINVKMHRITKTKLQIIYEKLTNI 213
           T+ + + L   +LD N ++S+++  F+  +   ++N+K ++I      I YE   N+
Sbjct: 111 TFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIA----TIAYETFQNL 163


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 182 NLVFVILCIFTFIFKHILHTTNSIFLIDLSELE 84
           N +  +     FI  HI+ T + IFL DL   E
Sbjct: 240 NTIETVAYSVIFILWHIVGTFSGIFLCDLIRRE 272


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 372 CLNYLFSELNSTTSEFR*KHFA 307
           CLN++ + L S   EF+ K  A
Sbjct: 257 CLNFITNNLKSENEEFKEKLLA 278


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 372 CLNYLFSELNSTTSEFR*KHFA 307
           CLN++ + L S   EF+ K  A
Sbjct: 257 CLNFITNNLKSENEEFKEKLLA 278


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 565 HHLPSQLHYYHHXC*NRISVNLSNHRH 485
           HH    +H  HH   + ++ N S   H
Sbjct: 324 HHAGHHIHAQHHVVNHHVAANGSLKHH 350


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 52  NDLFLFTNNLDSNSLKSIKKMEF 120
           ND  L +NNL+ N++ +  +  F
Sbjct: 152 NDFRLMSNNLNKNNVVATGRFTF 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,779
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)