Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A17
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   3.6  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      24   4.8  
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    24   4.8  
AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha su...    24   4.8  
AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha su...    24   4.8  
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    24   4.8  
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    24   4.8  
AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha su...    24   4.8  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 191 FTRNSPI*RLKIMFFPCYCATCVGGSYRIVTSLC 292
           +T   PI  LK   F  Y    V G Y ++  LC
Sbjct: 512 YTARHPIGSLKRFGFHTYLIDMVQGPYPVLNGLC 545


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 216 NVTSIIFLVALSEYDQILFESENEN 240


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 73  NVTSIIFLVALSEYDQILFESENEN 97


>AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha
           subunit AgGq5 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 30  NVTSIIFLVALSEYDQILFESENEN 54


>AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq4 protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 30  NVTSIIFLVALSEYDQILFESENEN 54


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 29  NVTSIIFLVALSEYDQILFESENEN 53


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 30  NVTSIIFLVALSEYDQILFESENEN 54


>AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq1 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 128 HTTNSIFLIDLSELESRLFVNKNKS 54
           + T+ IFL+ LSE +  LF ++N++
Sbjct: 29  NVTSIIFLVALSEYDQILFESENEN 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,341
Number of Sequences: 2352
Number of extensions: 10544
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)