Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A17
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein pr... 32 2.0
BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligas... 32 2.0
BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein. 32 2.0
AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein. 32 2.0
BC011675-1|AAH11675.1| 627|Homo sapiens coiled-coil domain cont... 30 6.2
BC000972-1|AAH00972.1| 627|Homo sapiens coiled-coil domain cont... 30 6.2
AJ005890-1|CAA06747.1| 627|Homo sapiens JM1 protein. 30 6.2
BC090871-1|AAH90871.1| 377|Homo sapiens ALS2CR2 protein protein. 30 8.2
BC008302-1|AAH08302.1| 418|Homo sapiens amyotrophic lateral scl... 30 8.2
AY093697-1|AAM19143.1| 418|Homo sapiens ILP-interacting protein... 30 8.2
AK027637-1|BAB55254.1| 418|Homo sapiens protein ( Homo sapiens ... 30 8.2
AC007282-3|AAY14692.1| 418|Homo sapiens unknown protein. 30 8.2
AB038950-1|BAB32500.1| 418|Homo sapiens amyotrophic lateral scl... 30 8.2
>BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein
protein.
Length = 1068
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 124 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKAL 303
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 304 NSE 312
N++
Sbjct: 516 NND 518
>BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligase
E3B protein.
Length = 1068
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 124 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKAL 303
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 304 NSE 312
N++
Sbjct: 516 NND 518
>BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein.
Length = 1026
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 124 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKAL 303
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 304 NSE 312
N++
Sbjct: 516 NND 518
>AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.
Length = 1068
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 124 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKAL 303
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 304 NSE 312
N++
Sbjct: 516 NND 518
>BC011675-1|AAH11675.1| 627|Homo sapiens coiled-coil domain
containing 22 protein.
Length = 627
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 220 ENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 399
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 400 QSKIETVEIQEVYVKKEITE 459
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
>BC000972-1|AAH00972.1| 627|Homo sapiens coiled-coil domain
containing 22 protein.
Length = 627
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 220 ENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 399
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 400 QSKIETVEIQEVYVKKEITE 459
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
>AJ005890-1|CAA06747.1| 627|Homo sapiens JM1 protein.
Length = 627
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 220 ENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 399
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 400 QSKIETVEIQEVYVKKEITE 459
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
>BC090871-1|AAH90871.1| 377|Homo sapiens ALS2CR2 protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
>BC008302-1|AAH08302.1| 418|Homo sapiens amyotrophic lateral
sclerosis 2 (juvenile) chromosome region, candidate 2
protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
>AY093697-1|AAM19143.1| 418|Homo sapiens ILP-interacting protein
ILPIPA protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
>AK027637-1|BAB55254.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ14731 fis, clone NT2RP3001938, weakly similar to
SPORULATION-SPECIFIC PROTEIN 1 (EC 2.7.1.-). ).
Length = 418
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
>AC007282-3|AAY14692.1| 418|Homo sapiens unknown protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
>AB038950-1|BAB32500.1| 418|Homo sapiens amyotrophic lateral
sclerosis 2 protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 193 YEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEMFLAELGR 336
++ LT++ + H L + L+NCNE LKAL + L+ R
Sbjct: 68 FDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFR 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,618,845
Number of Sequences: 237096
Number of extensions: 1378790
Number of successful extensions: 3386
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3382
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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