Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A17
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81549-8|CAB04469.1|  285|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF016416-2|AAB65274.2|  243|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    27   8.7  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/94 (22%), Positives = 44/94 (46%)
 Frame = +1

Query: 136 CLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEM 315
           CL+ N+++      K+  +++KL N    NH L L+   +   + Q+  +L+ K  + + 
Sbjct: 480 CLQRNLELRNYMAEKIVFVFQKLNNYHALNHFLMLIAKVL---RSQSSEDLLRKCYHKKD 536

Query: 316 FLAELGRSGVQLTEQVIETNSHHESLLSQSKIET 417
            L    +S +   E  +   ++HE  +  S  +T
Sbjct: 537 VLIGGIKSLLDSIECQMIDYTYHELDMLDSHFQT 570


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/94 (22%), Positives = 44/94 (46%)
 Frame = +1

Query: 136 CLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCNELMLKALNSEM 315
           CL+ N+++      K+  +++KL N    NH L L+   +   + Q+  +L+ K  + + 
Sbjct: 480 CLQRNLELRNYMAEKIVFVFQKLNNYHALNHFLMLIAKVL---RSQSSEDLLRKCYHKKD 536

Query: 316 FLAELGRSGVQLTEQVIETNSHHESLLSQSKIET 417
            L    +S +   E  +   ++HE  +  S  +T
Sbjct: 537 VLIGGIKSLLDSIECQMIDYTYHELDMLDSHFQT 570


>Z81549-8|CAB04469.1|  285|Caenorhabditis elegans Hypothetical
           protein F55C9.10 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 553 SEDDVPLKSIFKKDKEKQVPREMSECXKTN 642
           S DD   KSI++   + ++PR   EC  TN
Sbjct: 109 SSDDYDWKSIYEALNDLEIPRTTLECVSTN 138


>AF016416-2|AAB65274.2|  243|Caenorhabditis elegans Hypothetical
           protein F29A7.4 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 182 NLVFVILCIFTFIFKHILHTTNSIFLIDLSE 90
           +LVF+ LC F+FI    LH     F++ +S+
Sbjct: 22  HLVFISLCAFSFILHQQLHNLIGWFVLKISK 52


>Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical
           protein F25D1.4 protein.
          Length = 882

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 605 CFSLSFLNILFNG-TSSSESVALLPS 531
           C  +SF +I+F G  SSSE V++LPS
Sbjct: 386 CDDISFSSIVFGGKLSSSEIVSMLPS 411


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 307 SEMFLAELGRSGVQLTEQVIETNSHH-ESLLSQSKIETVEIQEVYVKKEITE 459
           +E F+  +    ++ ++Q+I   S   +  + Q  IET E +++YVK+E  E
Sbjct: 773 AESFIEPVRIPEIRSSQQLIAGPSETLDKDVKQEPIETEEFEKIYVKREAVE 824


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 307 SEMFLAELGRSGVQLTEQVIETNSHH-ESLLSQSKIETVEIQEVYVKKEITE 459
           +E F+  +    ++ ++Q+I   S   +  + Q  IET E +++YVK+E  E
Sbjct: 773 AESFIEPVRIPEIRSSQQLIAGPSETLDKDVKQEPIETEEFEKIYVKREAVE 824


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,768,806
Number of Sequences: 27780
Number of extensions: 240078
Number of successful extensions: 691
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)