Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A16
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 177 7e-46
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 170 1e-43
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 149 3e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 140 2e-34
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 99 4e-22
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 36 0.004
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 35 0.007
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 31 0.15
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 177 bits (432), Expect = 7e-46
Identities = 83/107 (77%), Positives = 93/107 (86%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+ VQ+DMKHWPF+V+S GK
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGK 98
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P ++V YKGE KTF PEE+SSMVL KM ETAEAYLG V +AV+TVP
Sbjct: 99 PVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 143 VGVFQHGKVEIIANDQ 190
VG F + +VEIIANDQ
Sbjct: 16 VGHFSNNRVEIIANDQ 31
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 170 bits (413), Expect = 1e-43
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F VQ+DMKHWPF+V+ GK
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGK 98
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P I+V +KGE KTF PEE+SSMVL KM E+AEA+LG V +AV+TVP
Sbjct: 99 PLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 143 VGVFQHGKVEIIANDQ 190
VG F + +VEIIANDQ
Sbjct: 16 VGHFSNNRVEIIANDQ 31
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 149 bits (361), Expect = 3e-37
Identities = 68/107 (63%), Positives = 84/107 (78%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++E Q D+KHWPF+V+ + G
Sbjct: 43 FVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGI 102
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P I+V Y GE K F +E+S+MVLTKM E +EA L K V+ AVITVP
Sbjct: 103 PTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVP 149
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 140 bits (338), Expect = 2e-34
Identities = 63/107 (58%), Positives = 83/107 (77%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF+ T+ D+K +PF +V+D +
Sbjct: 72 YVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNR 131
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P ++V G+ K F PEE+S+M+L+KM +TAEAYLGK V +AV+TVP
Sbjct: 132 PLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVP 178
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 143 VGVFQHGKVEIIANDQ 190
V V ++G+VEIIANDQ
Sbjct: 49 VAVMKNGRVEIIANDQ 64
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 99.1 bits (236), Expect = 4e-22
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +3
Query: 216 VAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
VAFT D ERL+G +AK Q +NP NT F KRLIGR+F+ VQ D+K P+++V
Sbjct: 88 VAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG 147
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
+ KT+ P ++ +L+KM ETA YLGK V+NAV+TVP
Sbjct: 148 ---DAWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVP 191
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 50.8 bits (116), Expect = 1e-07
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQ-ADMKHWPFEVVSDGGK 392
V++ + R +G+AAK+ A N NT+ KRL GR ++ ++ + ++ G
Sbjct: 43 VSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGF 102
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
KV Y E+ F ++ + TK+ AEA L +V + VI++P
Sbjct: 103 VGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Frame = +3
Query: 246 GDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPXIKVAYKGED 425
G A+ Q+ N +N++ + + L+G+ + T+ H+ V+ G+ K+ + ++
Sbjct: 72 GVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDE 129
Query: 426 ------KTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
K E S L ++ E+AE +LG V V++VP
Sbjct: 130 ESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVP 171
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.1 bits (77), Expect = 0.007
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEXATVQADMKHWPFEVVSDGGK 392
VAF ER+ G A N P ++I + K L+ E VQ +P + + +
Sbjct: 61 VAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEE 120
Query: 393 PXIKVAYK-GEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
+++ +++ + EE+ +M + AE + + + V+TVP
Sbjct: 121 TTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVP 168
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKP 395
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 396 XIKVAYKGEDKTFFPE 443
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,048,448
Number of Sequences: 5004
Number of extensions: 36469
Number of successful extensions: 96
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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