Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A16
(562 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 171 4e-43
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 170 6e-43
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 8e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 75 3e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 8e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 48 5e-06
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013) 29 2.6
SB_30369| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.6
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.6
SB_11120| Best HMM Match : DUF1080 (HMM E-Value=0.082) 29 2.6
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 4.5
SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 28 6.0
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 27 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 171 bits (415), Expect = 4e-43
Identities = 78/107 (72%), Positives = 90/107 (84%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+ V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P I+V +KGE K+FFPEE+SSMVLTKM ETAEAYLG V +AV+TVP
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MAKAPAARNRSGYHATLAVGVFQHGKVEIIANDQ 190
MAK PA G + VGVFQHGKVEIIANDQ
Sbjct: 1 MAKTPAVGIDLGTTYS-CVGVFQHGKVEIIANDQ 33
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 170 bits (414), Expect = 6e-43
Identities = 79/107 (73%), Positives = 92/107 (85%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++ ATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P I+V YKGE KTF EE+SSMVL KM ETAEAYLG+ V +AVITVP
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MAKAPAARNRSGYHATLAVGVFQHGKVEIIANDQ 190
M KAPA G + VGVFQ+GKVEIIANDQ
Sbjct: 1 MGKAPAIGIDLGTTYS-CVGVFQNGKVEIIANDQ 33
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 146 bits (355), Expect = 8e-36
Identities = 80/132 (60%), Positives = 90/132 (68%), Gaps = 25/132 (18%)
Frame = +3
Query: 213 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 392
YVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+ V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 393 PXIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMXETAEAYL 497
P +KV YKGE KTFF EEV SSMVL KM ETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 498 GKTVQNAVITVP 533
G V +AV+TVP
Sbjct: 161 GCKVTDAVVTVP 172
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3
Query: 444 EVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
++SSMVL KM ETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MAKAPAARNRSGYHATLAVGVFQHGKVEIIANDQ 190
M KAPA G + VGVFQHGKVEIIANDQ
Sbjct: 1 MTKAPAIGIDLGTTYS-CVGVFQHGKVEIIANDQ 33
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 139 bits (336), Expect = 2e-33
Identities = 68/108 (62%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Frame = +3
Query: 213 YVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGG 389
YVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++ +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 390 KPXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
KP ++V K E KTF EE+S+MVLTKM ETAEAYLGK V +AV+TVP
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 143 VGVFQHGKVEIIANDQ 190
VGVF++G+VEIIANDQ
Sbjct: 715 VGVFKNGRVEIIANDQ 730
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSD-GGK 392
VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
V KG PEE+ V+ K+ AE L TV AV++VP
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP 177
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 67.3 bits (157), Expect = 8e-12
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 NPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVS-DGGKPXIKVAYKGEDKTFFPEEVS 452
N NTI KR IGRKF VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 453 SMVLTKMXETAEAYLGKTVQNAVITVP 533
+M+ T++ TAE L V + VI+VP
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVP 204
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +3
Query: 399 IKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
I V GE ++F PE++S++VL ++ AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 393 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVP 533
P +K Y+ D TF PEE+ M+L E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
Length = 119
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 303 KRLIGRKFEXATVQADMKHWPFEVVSDGGKPXIKVAYKGEDKTFFPEEVSSMVLTKMXET 482
K ++G + E A + + WPF+V + K + K P + +++ +TKM E
Sbjct: 42 KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100
Query: 483 AEAYLGKT 506
+ G T
Sbjct: 101 QQELSGNT 108
>SB_30369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 171 STFPCWKTPTARVAWYPDRFLAAGAFAILYF*SVVV 64
STFPC P A W+ + + AG+ A +Y V+V
Sbjct: 697 STFPCSNGPPATGTWFNIKVVVAGSQARVYRDGVLV 732
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 297 RILCCWGSSPPGSWRH 250
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 297 RILCCWGSSPPGSWRH 250
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_11120| Best HMM Match : DUF1080 (HMM E-Value=0.082)
Length = 748
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 171 STFPCWKTPTARVAWYPDRFLAAGAFAILYF*SVVV 64
STFPC P A W+ + + AG+ A +Y V+V
Sbjct: 678 STFPCSNGPPATGTWFNIKVVVAGSQARVYRDGVLV 713
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 224 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRXCYCASRHEALA 364
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_34973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -2
Query: 189 WSLAMISTFPCWKTPTARVAWYPDRFLAAGAFAILYF*SVVVTCSLKQLSKRARLTASLQ 10
WS + FP W R YP +++A I + + C ++ L+KR+ + +L
Sbjct: 114 WSEIGGTEFPSWVVNGFRKCAYPSDYISAAISGIRF-----LACQVENLAKRSSCSCTLD 168
Query: 9 VK 4
++
Sbjct: 169 LR 170
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 224 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRXCYCASR 349
H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 282 HGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 224 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRXCYCASRH 352
H R +R+ + GG +EP + R T T C+CA R+
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRY 1226
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 188 QXQQDHSVLCCVH--RHRASHRRCRQEPGGDEPQQHNI-RCQTSHR 316
Q + H V C R RASHR C + P P++H + R + +H+
Sbjct: 793 QQTKRHFVSCSRRWPRGRASHRACARAPKMPPPERHALTRLRHTHQ 838
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 361 QCFMSACTVAXSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 215
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,288,431
Number of Sequences: 59808
Number of extensions: 318229
Number of successful extensions: 789
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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