Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A16
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   5.2  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   6.8  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 204 WSCXXWSLAMISTFPCWKT 148
           W C  WS+A   T  C +T
Sbjct: 21  WDCTVWSMASNRTVRCPRT 39


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = -3

Query: 464 KHHGTDFLGEKGFVFTLICYLDXRFASITDNLERPVLHVG 345
           KHHG  F     F    +   D     I +  E  + H+G
Sbjct: 263 KHHGVPFYVAAPFTSIDVAIEDGSHIKIEERPEHELTHIG 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,341
Number of Sequences: 2352
Number of extensions: 9669
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)