Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A15
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    79   6e-17
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   0.60 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.8  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   4.2  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   4.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   4.2  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   7.4  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    22   9.8  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    22   9.8  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    22   9.8  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 79.4 bits (187), Expect = 6e-17
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +3

Query: 378 LREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRXG 488
           LREDLERLK+I AHRGMRHYWGLRVRGQHTKTTGR G
Sbjct: 1   LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGRRG 37


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 177 YSNIVLKKADIDLDKRAGECTEEEV-EKIITIMSNPXQYK 293
           Y+ IVL +A + LDK   +C  + +  +II +     +Y+
Sbjct: 534 YAYIVLVQAVLPLDKNLNDCNRQSILGRIIRVTDEVIEYR 573


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 63  SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVG 170
           S ++P+ F H+ R+   +++  +   F+ T + G+G
Sbjct: 106 SKLLPNSFVHLARLKALSLEFCKIAKFSSTVLAGLG 141


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 149 HRKHNLSFAIDVRIHDTKNMLKFVWNDQRHF 57
           H+   + FAI+    D ++  + +W+D+  F
Sbjct: 38  HKNARVLFAIEHMFFDEEDWRRVLWSDESKF 68


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 119 RWQTKGYVCDDGY 157
           RW   GYVCDDG+
Sbjct: 787 RW---GYVCDDGF 796


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 119 RWQTKGYVCDDGY 157
           RW   GYVCDDG+
Sbjct: 786 RW---GYVCDDGF 795


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 336 GKYSQLTSSNLDSKLREDLERLKKIRAHRG 425
           G+Y +LT ++L ++ R+D   L +I+   G
Sbjct: 63  GRYYELTGADLFARWRQDYGDLIRIKGMFG 92


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 213 IAHSTSSIVHGPSHLS 228


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 215 IAHSTSSIVHGPSHLS 230


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 244 IAHSTSSIVHGPSHLS 259


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 213 IAHSTSSIVHGPSHLS 228


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 IIFSTSSSVHSPARLS 215
           I  STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,507
Number of Sequences: 2352
Number of extensions: 10476
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)