BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP02_F_A15 (489 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical p... 235 9e-63 U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress ... 28 3.2 AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stres... 28 3.2 U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical pr... 28 4.2 L23645-3|AAK26139.1| 211|Caenorhabditis elegans Zinc finger pro... 28 4.2 AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 27 5.5 AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 27 5.5 AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 27 5.5 AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 27 5.5 Z81054-9|CAB02883.2| 540|Caenorhabditis elegans Hypothetical pr... 27 7.3 U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 7.3 AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 7.3 U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical pr... 27 9.7 AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 27 9.7 AL132862-6|CAB60535.2| 205|Caenorhabditis elegans Hypothetical ... 27 9.7 AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 9.7 AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 9.7 AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 9.7 AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 27 9.7 >Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical protein Y57G11C.16 protein. Length = 154 Score = 235 bits (576), Expect = 9e-63 Identities = 105/143 (73%), Positives = 125/143 (87%) Frame = +3 Query: 60 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239 MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ + +KAD+D++KRAGE T Sbjct: 1 MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60 Query: 240 EEEVEKIITIMSNPXQYKIPXWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 419 EE+ +KI+TIM NP QYKIP WFLNRQKDI DGK QL S+ +D+KLREDLER+KKIR H Sbjct: 61 EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120 Query: 420 RGMRHYWGLRVRGQHTKTTGRXG 488 RG+RHYWGLRVRGQHTKTTGR G Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRKG 143 >U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress resistant protein 1 protein. Length = 643 Score = 28.3 bits (60), Expect = 3.2 Identities = 20/84 (23%), Positives = 42/84 (50%) Frame = +3 Query: 9 FPLLFVVLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNI 188 F LF++LG + L+ S D +L + K + +M A++ +G ++ + Sbjct: 4 FLFLFLLLGFCIAPLSAQSPSTSDAPGALLSSLVGKSHQKLPLAPSMEALELMGVQFVDA 63 Query: 189 VLKKADIDLDKRAGECTEEEVEKI 260 ++KK +++ K A + E +EK+ Sbjct: 64 LIKKGQMEMAKGAFKTQLEVLEKV 87 >AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stress resistance protein protein. Length = 643 Score = 28.3 bits (60), Expect = 3.2 Identities = 20/84 (23%), Positives = 42/84 (50%) Frame = +3 Query: 9 FPLLFVVLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNI 188 F LF++LG + L+ S D +L + K + +M A++ +G ++ + Sbjct: 4 FLFLFLLLGFCIAPLSAQSPSTSDAPGALLSSLVGKSHQKLPLAPSMEALELMGVQFVDA 63 Query: 189 VLKKADIDLDKRAGECTEEEVEKI 260 ++KK +++ K A + E +EK+ Sbjct: 64 LIKKGQMEMAKGAFKTQLEVLEKV 87 >U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical protein C09B9.7 protein. Length = 913 Score = 27.9 bits (59), Expect = 4.2 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +3 Query: 264 TIMSNPXQYKIPXWFLNRQK-DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 440 +I NP + LNR D KY SS+++ ++ DLE+LKKI + ++ Y Sbjct: 111 SIRDNPVSQSLANILLNRDTAPYYDYKY---LSSDIELMVK-DLEKLKKINKEKTLKMY- 165 Query: 441 GLRVRG 458 GL G Sbjct: 166 GLLAHG 171 >L23645-3|AAK26139.1| 211|Caenorhabditis elegans Zinc finger protein protein 1,isoform b protein. Length = 211 Score = 27.9 bits (59), Expect = 4.2 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 18 LFVVLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRK 134 LF++LGTL+ T I ++ H ++ + GKRK Sbjct: 15 LFLLLGTLIVACTVKKEKIKERHNHNRTLLKRTVGGKRK 53 >AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein protein. Length = 577 Score = 27.5 bits (58), Expect = 5.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 402 KKIRAHRGMRHYWGLRVRGQHTKTT 476 K + AH RH+ G+ + GQH +T Sbjct: 523 KVLDAHSSSRHHSGMSIHGQHPPST 547 >AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65 homolog protein1, isoform c protein. Length = 554 Score = 27.5 bits (58), Expect = 5.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 402 KKIRAHRGMRHYWGLRVRGQHTKTT 476 K + AH RH+ G+ + GQH +T Sbjct: 500 KVLDAHSSSRHHSGMSIHGQHPPST 524 >AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65 homolog protein1, isoform a protein. Length = 691 Score = 27.5 bits (58), Expect = 5.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 402 KKIRAHRGMRHYWGLRVRGQHTKTT 476 K + AH RH+ G+ + GQH +T Sbjct: 662 KVLDAHSSSRHHSGMSIHGQHPPST 686 >AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65 homolog protein1, isoform b protein. Length = 640 Score = 27.5 bits (58), Expect = 5.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 402 KKIRAHRGMRHYWGLRVRGQHTKTT 476 K + AH RH+ G+ + GQH +T Sbjct: 611 KVLDAHSSSRHHSGMSIHGQHPPST 635 >Z81054-9|CAB02883.2| 540|Caenorhabditis elegans Hypothetical protein F01D4.1 protein. Length = 540 Score = 27.1 bits (57), Expect = 7.3 Identities = 10/36 (27%), Positives = 19/36 (52%) Frame = +3 Query: 12 PLLFVVLGTLVRNLTKMSLVIPDKFQHILRIMNTNI 119 P F+ +G + + K V+P+ + HIL + N + Sbjct: 276 PSKFIEIGGIAADEKKHDEVLPESYDHILNLRNRTV 311 >U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein C13F10.4 protein. Length = 2076 Score = 27.1 bits (57), Expect = 7.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +2 Query: 143 CDDGYQRCWPEVLQHCS 193 C + YQ CWP +L CS Sbjct: 1512 CREYYQICWPPILLACS 1528 >AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical protein Y32H12A.8 protein. Length = 3901 Score = 27.1 bits (57), Expect = 7.3 Identities = 16/53 (30%), Positives = 20/53 (37%) Frame = +2 Query: 20 VCXFGNVG*KLNQNVAGHSRQISTYSSYHEYEHRWQTKGYVCDDGYQRCWPEV 178 VC FG VG NV GH + + G C G Q WP++ Sbjct: 792 VCRFGIVGMTFQCNVCGHCMHTDHAYQWFQKTKECAFVGCPCTCG-QNTWPDM 843 >U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical protein C29H12.2 protein. Length = 393 Score = 26.6 bits (56), Expect = 9.7 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 3 FSFPLLFVV-LGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMF 143 + P LF V L L +T L+IP + H+ R +TN +G+ + +F Sbjct: 212 YDVPALFAVGLEGLFGMVTLSILMIPFYYIHVPRTFSTNPEGRLEDVF 259 >AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cysteine protease inhibitorprotein. Length = 362 Score = 26.6 bits (56), Expect = 9.7 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +3 Query: 60 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239 + L P Q I +NT +GK K + +IK N + KAD D DK G Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174 Query: 240 EEE 248 E+ Sbjct: 175 SEQ 177 >AL132862-6|CAB60535.2| 205|Caenorhabditis elegans Hypothetical protein Y73F8A.10 protein. Length = 205 Score = 26.6 bits (56), Expect = 9.7 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Frame = +1 Query: 58 KCRWSFQTNFNIFFVS*IRTSMAN------ERLCLR*RLSKVLAGGTPTLFSKKPTLI 213 KC S +FN F++ ++ S + E LC + + + LA G P++F+ P L+ Sbjct: 73 KCDCSSPNSFNTGFLNKLQVSEVSDDGCLYEILCAQNQPNSYLAAGPPSVFTLNPYLL 130 >AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical protein M01B12.4b protein. Length = 644 Score = 26.6 bits (56), Expect = 9.7 Identities = 19/75 (25%), Positives = 31/75 (41%) Frame = +3 Query: 189 VLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPXWFLNRQKDIVDGKYSQLTSSNL 368 VLK+ I L KR + E+E K +T+ K G + T + L Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104 Query: 369 DSKLREDLERLKKIR 413 D+ + + + KK+R Sbjct: 105 DNLPKSEQQYDKKLR 119 >AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical protein M01B12.4c protein. Length = 678 Score = 26.6 bits (56), Expect = 9.7 Identities = 19/75 (25%), Positives = 31/75 (41%) Frame = +3 Query: 189 VLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPXWFLNRQKDIVDGKYSQLTSSNL 368 VLK+ I L KR + E+E K +T+ K G + T + L Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104 Query: 369 DSKLREDLERLKKIR 413 D+ + + + KK+R Sbjct: 105 DNLPKSEQQYDKKLR 119 >AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical protein M01B12.4a protein. Length = 634 Score = 26.6 bits (56), Expect = 9.7 Identities = 19/75 (25%), Positives = 31/75 (41%) Frame = +3 Query: 189 VLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPXWFLNRQKDIVDGKYSQLTSSNL 368 VLK+ I L KR + E+E K +T+ K G + T + L Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104 Query: 369 DSKLREDLERLKKIR 413 D+ + + + KK+R Sbjct: 105 DNLPKSEQQYDKKLR 119 >AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3 protein. Length = 362 Score = 26.6 bits (56), Expect = 9.7 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +3 Query: 60 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239 + L P Q I +NT +GK K + +IK N + KAD D DK G Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174 Query: 240 EEE 248 E+ Sbjct: 175 SEQ 177 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,250,596 Number of Sequences: 27780 Number of extensions: 231372 Number of successful extensions: 748 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 748 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 914086948 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -