Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A14
(445 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 97 4e-21
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 93 6e-20
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 88 2e-18
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 81 4e-16
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 79 1e-15
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 79 1e-15
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 43 9e-05
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 40 0.001
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 40 0.001
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.093
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 33 0.093
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 33 0.093
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 31 0.28
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 31 0.28
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 1.5
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 4.6
U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone... 27 4.6
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 27 4.6
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 4.6
AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical ... 27 6.1
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 97.5 bits (232), Expect = 4e-21
Identities = 48/98 (48%), Positives = 65/98 (66%)
Frame = +2
Query: 77 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 256
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 257 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 370
T + FK G+EF+E DG VKSV FE +QK
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 93.5 bits (222), Expect = 6e-20
Identities = 46/94 (48%), Positives = 62/94 (65%)
Frame = +2
Query: 86 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 265
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 266 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ 367
+ FK GEEF E+ D S+ TFE L Q
Sbjct: 65 LSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQ 98
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/95 (43%), Positives = 65/95 (68%)
Frame = +2
Query: 86 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 265
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 266 MKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 370
++F G EF+E DG + KS T E + VQK
Sbjct: 64 LEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQK 98
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 81.0 bits (191), Expect = 4e-16
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = +2
Query: 86 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 265
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 266 MKFKPGEEFEEDRADGAKVKSVCTFE 343
+ FK E+F E D ++ TFE
Sbjct: 65 LAFKIREKFVEIAPDERSYNTLVTFE 90
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 79.0 bits (186), Expect = 1e-15
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +2
Query: 77 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 256
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 257 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDG 382
+K+K G +E ADG V SV + E + L Q++ G
Sbjct: 62 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGG 103
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 79.0 bits (186), Expect = 1e-15
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +2
Query: 77 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 256
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 257 TTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDG 382
+K+K G +E ADG V SV + E + L Q++ G
Sbjct: 77 NYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQIETGKGG 118
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 43.2 bits (97), Expect = 9e-05
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +2
Query: 74 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSS 247
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +YN+ +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 248 TFKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 361
+ K T + ++ G++FE DG + + F+ L +
Sbjct: 61 SKKNTNYQAWELGKKFEAPGLDGNQHEITFDFKDEILSE 99
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 77 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 250
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 251 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 361
K T ++ G+ FE + DG K +F+ L +
Sbjct: 67 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSE 104
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 77 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 250
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 251 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 361
K T ++ G+ FE + DG K +F+ L +
Sbjct: 82 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFKDGVLSE 119
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.093
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 116 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.093
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 116 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 33.1 bits (72), Expect = 0.093
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 116 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.28
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +2
Query: 104 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF--- 274
+ + SENFDE++ G G TRK T K+ ++ NL S + + F
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKN 88
Query: 275 -KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 370
+ G +FE + D K + T + L + K
Sbjct: 89 VQIGSKFEGEGLDNTKHEVTFTLKDGHLFEHHK 121
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 31.5 bits (68), Expect = 0.28
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +2
Query: 104 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP- 280
+ + SENFDE++ G G TRK T K ++ S+ ++ +K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 281 --GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDG 382
G+ F+ + D K + T + L + K +G
Sbjct: 88 QLGKAFQGEGLDSTKHEITFTLKDGHLFEHHKPLEG 123
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 170 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 298
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 270 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 130
F S++ K VT S +L SST + +A+ I PT +F NSS
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 39 protein.
Length = 384
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 161 LITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTF 340
+IT+ ++ V+ +EL+ +EY L+ F + K ++ +E A K+ F
Sbjct: 230 IITQISSLVVSKFIELKVTNEEYVLLVMLFFCNPAISHKLSDKAKESLAKYQKMYCSALF 289
Query: 341 EGNTLKQVQKAPDGLE 388
+K + AP LE
Sbjct: 290 NYCQIKYKKAAPARLE 305
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +2
Query: 140 MKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAK 319
+K + G I +K + P + + +DG Y K ++FK E FE+ +
Sbjct: 241 IKVLPAGKIEKKLIKELNPEMMVGRDGRRYRQKLREAEKQATVEFKL-ENFEQTNGEAQS 299
Query: 320 VKS 328
V++
Sbjct: 300 VEN 302
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 149 IGVGLITRKAANAVTPTVELRKDGDEYNL 235
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
>AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical
protein Y51H4A.4 protein.
Length = 185
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 324 NPYAHSKATPSSKSRRPPTVLKSLTSGNSALEEMKAV 434
NP+A S +PSS S T ++ SG+S ++ K V
Sbjct: 59 NPHATSSFSPSSSSTSSTTSSQNQQSGSSGSKKKKPV 95
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 255 LKVEEVTKLYSSPSLRSSTVGVTALAALRV 166
LK V KL+ P +SS VGV A +R+
Sbjct: 286 LKSRNVFKLFCCPFSKSSQVGVVAQPVMRI 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,229,707
Number of Sequences: 27780
Number of extensions: 179714
Number of successful extensions: 588
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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