Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A10
         (585 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p pro...    84   2e-16
AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-P...    84   2e-16
AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p pro...    71   1e-12
AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA...    71   1e-12

>AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p
           protein.
          Length = 103

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +3

Query: 132 MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARK-ENGDF 308
           MA A+K+++P+LDR+LI+RAEA+TKT GGIV+PEKA  KVL G V+AVGPG R    G+ 
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNH 60

Query: 309 IP 314
           IP
Sbjct: 61  IP 62



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 313 PLQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 438
           P+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 62  PIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103


>AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-PA
           protein.
          Length = 103

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +3

Query: 132 MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARK-ENGDF 308
           MA A+K+++P+LDR+LI+RAEA+TKT GGIV+PEKA  KVL G V+AVGPG R    G+ 
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNH 60

Query: 309 IP 314
           IP
Sbjct: 61  IP 62



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 313 PLQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 438
           P+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 62  PIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103


>AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p
           protein.
          Length = 102

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = +3

Query: 132 MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENG 302
           M+N +K+++P+LDR+LI+R E  T TAGGI++PE++  K + G VVAVGPGAR   G
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAG 57



 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +1

Query: 322 VSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 438
           V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 65  VKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102


>AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA
           protein.
          Length = 102

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = +3

Query: 132 MANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENG 302
           M+N +K+++P+LDR+LI+R E  T TAGGI++PE++  K + G VVAVGPGAR   G
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAG 57



 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +1

Query: 322 VSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 438
           V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 65  VKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,135,513
Number of Sequences: 53049
Number of extensions: 439208
Number of successful extensions: 1007
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)