Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_A06
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   2.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/17 (52%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
 Frame = -1

Query: 181 IALIT-WRLGIFXSSVC 134
           ++L+T W+L IF SS+C
Sbjct: 5   LSLVTLWKLTIFLSSMC 21


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 112 LATMTPSLKRYS*IATRFCLGI 47
           L T TP   ++   + RFCL I
Sbjct: 302 LVTFTPDRSKFRPSSLRFCLNI 323


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 112 LATMTPSLKRYS*IATRFCLGI 47
           L T TP   ++   + RFCL I
Sbjct: 27  LVTFTPDRSKFRPSSLRFCLNI 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,304
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)