Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_A05
(617 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86NN8 Cluster: RH49324p; n=16; Arthropoda|Rep: RH49324... 152 7e-36
UniRef50_A6N9T0 Cluster: Cytochrome c oxidase polyprotein Vb; n=... 135 9e-31
UniRef50_UPI0000584579 Cluster: PREDICTED: similar to cytochrome... 117 3e-25
UniRef50_A7SG22 Cluster: Predicted protein; n=1; Nematostella ve... 99 7e-20
UniRef50_P90849 Cluster: Putative uncharacterized protein cco-1;... 98 1e-19
UniRef50_P10606 Cluster: Cytochrome c oxidase subunit 5B, mitoch... 94 3e-18
UniRef50_Q9VMB8 Cluster: CG11043-PA; n=6; Sophophora|Rep: CG1104... 87 2e-16
UniRef50_Q5DB28 Cluster: SJCHGC01711 protein; n=2; Schistosoma j... 68 2e-10
UniRef50_P79010 Cluster: Cytochrome c oxidase polypeptide IV, mi... 59 1e-07
UniRef50_P92683 Cluster: Cytochrome c oxidase subunit Vb; n=7; M... 57 4e-07
UniRef50_P06809 Cluster: Cytochrome c oxidase polypeptide IV, mi... 56 9e-07
UniRef50_Q1EMP4 Cluster: Cytochrome c oxidase subunit 5b; n=1; P... 53 6e-06
UniRef50_Q2UEE5 Cluster: Cytochrome c oxidase; n=1; Aspergillus ... 52 8e-06
UniRef50_A7P5P3 Cluster: Chromosome chr4 scaffold_6, whole genom... 49 1e-04
UniRef50_Q5DFC5 Cluster: SJCHGC06267 protein; n=1; Schistosoma j... 46 0.001
UniRef50_A5DU86 Cluster: Cytochrome c oxidase polypeptide IV, mi... 46 0.001
UniRef50_P04037 Cluster: Cytochrome c oxidase polypeptide IV, mi... 46 0.001
UniRef50_Q9LW15 Cluster: Cytochrome c oxidase subunit Vb-like pr... 44 0.002
UniRef50_Q01GC2 Cluster: Cytochrome c oxidase, subunit Vb/COX4; ... 42 0.016
UniRef50_Q6CS03 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 41 0.021
UniRef50_Q5K8Q1 Cluster: Cytochrome c oxidase polypeptide iv, mi... 38 0.14
UniRef50_A5B9Z5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.58
UniRef50_Q28KY0 Cluster: NADH dehydrogenase; n=8; Proteobacteria... 33 5.5
UniRef50_Q1BYJ1 Cluster: Methyltransferase FkbM; n=2; Burkholder... 33 5.5
UniRef50_Q7NJ59 Cluster: Glr1973 protein; n=3; Cyanobacteria|Rep... 32 9.5
UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13; Euth... 32 9.5
>UniRef50_Q86NN8 Cluster: RH49324p; n=16; Arthropoda|Rep: RH49324p -
Drosophila melanogaster (Fruit fly)
Length = 154
Score = 152 bits (368), Expect = 7e-36
Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +2
Query: 65 TMASLC-RQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFN 241
TMAS+C R LRA A ++V R KMM DPLEHATG+E++ELL AGND+PF+
Sbjct: 34 TMASICGRMALRAAARQNVAYTPVR---FCKMMNDPLEHATGIEKRELLLKAAGNDNPFD 90
Query: 242 MKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWY 409
MKV K+ AGT+ENP L+PS FDARIVGCICEE T + W+WL K +RCECGHW+
Sbjct: 91 MKVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWF 146
>UniRef50_A6N9T0 Cluster: Cytochrome c oxidase polyprotein Vb; n=4;
Arthropoda|Rep: Cytochrome c oxidase polyprotein Vb -
Ornithodoros parkeri
Length = 122
Score = 135 bits (326), Expect = 9e-31
Identities = 58/114 (50%), Positives = 80/114 (70%)
Frame = +2
Query: 68 MASLCRQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMK 247
MASL + L NA R++I+ R +K + D E+A G E+ EL A+ AGN+DPF+M+
Sbjct: 1 MASLVGRSLVKNARRALIINARRYKSEEKRIFDAREYACGKEKLELDAIAAGNEDPFDMR 60
Query: 248 VVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWY 409
V K+ GT++NP L+PS + R++GCICEE AT I W+WLH+ PRRCECGHW+
Sbjct: 61 VFKRGPGTKDNPNLIPSYLEKRMIGCICEEDATVINWMWLHRGDPRRCECGHWF 114
>UniRef50_UPI0000584579 Cluster: PREDICTED: similar to cytochrome c
oxidase, subunit VB, putative; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase, subunit VB, putative - Strongylocentrotus
purpuratus
Length = 128
Score = 117 bits (281), Expect = 3e-25
Identities = 51/102 (50%), Positives = 68/102 (66%)
Frame = +2
Query: 104 AFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENP 283
A R + ++R A +PD EHATGLE+KEL ++AG+ DPF + V + +AGT+ P
Sbjct: 14 ARRCLYSQSSRAMAAGGGIPDNFEHATGLEKKELDRIKAGDSDPFQLNVRRVAAGTKTKP 73
Query: 284 TLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWY 409
V S F RIVGCICEE T I W+WL+ +P+RCECGHW+
Sbjct: 74 VEVTSAFQKRIVGCICEEEQTHINWMWLYTGEPQRCECGHWF 115
>UniRef50_A7SG22 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 91
Score = 99.1 bits (236), Expect = 7e-20
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +2
Query: 173 EHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAI 352
E ATGLE+ E AL AG +DPF +K+ GT++NPT+VPS ++ RIVGC+CEE AT I
Sbjct: 1 EQATGLEKAEYDALVAGYEDPFRLKMANGPPGTKDNPTIVPSGYEERIVGCVCEEDATMI 60
Query: 353 TWLWLHKDQPRRCECGHWY 409
W+ L P+RC+CG+++
Sbjct: 61 RWMLLKAGPPQRCDCGNYF 79
>UniRef50_P90849 Cluster: Putative uncharacterized protein cco-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cco-1 - Caenorhabditis elegans
Length = 132
Score = 98.3 bits (234), Expect = 1e-19
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +2
Query: 161 PDPLEHATGLERKELLALQAGNDDPFNMKVVKKS-AGTRENPTLVPSCFDARIVGCICEE 337
PDPLEHATG E+K LLA AG DD + KV ++ A T++ P LVPS +D RI+GC+CE+
Sbjct: 40 PDPLEHATGREKKMLLARLAG-DDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMCEQ 98
Query: 338 HATAITWLWLHKDQPRRCECGHWY 409
+ + ++ + K P+RCECGHW+
Sbjct: 99 DSGHVNFMTIRKGDPKRCECGHWF 122
>UniRef50_P10606 Cluster: Cytochrome c oxidase subunit 5B,
mitochondrial precursor; n=38; Euteleostomi|Rep:
Cytochrome c oxidase subunit 5B, mitochondrial precursor
- Homo sapiens (Human)
Length = 129
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 158 MPDPLEHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICEE 337
+P E ATGLER+ +LA + G D P+N+ K ++GTRE+P LVPS + RIVGCICEE
Sbjct: 37 VPTDEEQATGLEREIMLAAKKGLD-PYNVLAPKGASGTREDPNLVPSISNKRIVGCICEE 95
Query: 338 HATAITWLWLHKDQPRRC-ECGHWY 409
T++ W WLHK + +RC CG Y
Sbjct: 96 DNTSVVWFWLHKGEAQRCPRCGAHY 120
>UniRef50_Q9VMB8 Cluster: CG11043-PA; n=6; Sophophora|Rep:
CG11043-PA - Drosophila melanogaster (Fruit fly)
Length = 154
Score = 87.4 bits (207), Expect = 2e-16
Identities = 34/78 (43%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +2
Query: 182 TGLERKELLALQAGNDDPFNM-KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITW 358
TG++++E+L + G +DP+ KV+++ +G +PT+VPS FDAR+VGC+C + W
Sbjct: 70 TGIQKREMLLAKQGCEDPWGFSKVIRRGSGRENDPTVVPSAFDARLVGCLCLDDRLP-KW 128
Query: 359 LWLHKDQ-PRRCECGHWY 409
+W+ KD+ P+RCECGH++
Sbjct: 129 MWIEKDEGPKRCECGHYF 146
>UniRef50_Q5DB28 Cluster: SJCHGC01711 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01711 protein - Schistosoma
japonicum (Blood fluke)
Length = 143
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 170 LEHATGLERKELLALQAGNDDPFNMKVVK-KSAGTRENPTLVPSCFDARIVGCICEEHAT 346
L A + EL++ DPF ++ ++ + +R++P L+PS R+VGCICE A
Sbjct: 49 LTEAVNTKNFELVSKIVTEQDPFEVRRIRIPTNNSRKSPNLIPSQSGRRMVGCICEPEAD 108
Query: 347 AITWLWLHKDQPRRCECGHWY 409
+I WL L K P +C CG+W+
Sbjct: 109 SINWLELEKGDPVQCYCGYWF 129
>UniRef50_P79010 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 164
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +2
Query: 140 GYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKS-AGTRENPTLVPSCFDARI 316
G D +P LE ATGLER ELL+ +G D F+MK + S GT +P +V S R
Sbjct: 59 GGRDGEVPTDLEQATGLERYELLSELSGR-DAFDMKPLDASRKGTLTDPIMVTSLDPYRH 117
Query: 317 VGCICEEHAT-AITWLWLHKDQPRRC-ECGHWY 409
+GC + + W+ ++KD+ RRC ECG Y
Sbjct: 118 IGCTGSPSGSHNLIWMTVYKDKLRRCPECGSVY 150
>UniRef50_P92683 Cluster: Cytochrome c oxidase subunit Vb; n=7;
Magnoliophyta|Rep: Cytochrome c oxidase subunit Vb -
Oryza sativa subsp. japonica (Rice)
Length = 169
Score = 56.8 bits (131), Expect = 4e-07
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +2
Query: 71 ASLCRQILRANAFRSVILPTARRGYADK--MMPDPLEHATGLERKELLALQAGNDDPFNM 244
ASL R + A + T+ DK + D + ATGLER+EL A G + F+M
Sbjct: 31 ASLARAAPLSTAAAAAFRRTSPLLSGDKPATVEDVMPIATGLEREELAAELKG-EKRFDM 89
Query: 245 KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATA--ITWLWLHKDQPRRCE-CGHWY 409
GT+E P ++ S ++ RIVGC E + W WL KD+P C C ++
Sbjct: 90 DPPVGPFGTKEAPAVIESYYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYF 147
>UniRef50_P06809 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor; n=16; Pezizomycotina|Rep:
Cytochrome c oxidase polypeptide IV, mitochondrial
precursor - Neurospora crassa
Length = 186
Score = 55.6 bits (128), Expect = 9e-07
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +2
Query: 140 GYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKS-AGTRENPTLVPSCFDARI 316
G A +P LE ATGLER E+L G D F+MK + S GT ENP V S D +
Sbjct: 57 GAAPGTVPTDLEQATGLERLEILGKMEG-VDVFDMKPLDASRRGTMENPISVRSAGDEQY 115
Query: 317 VGCI-CEEHATAITWLWLHKDQP-RRC-ECGHWY 409
GC + + WL + +++P RC ECG+ Y
Sbjct: 116 AGCTGFPADSHNVIWLTMTRERPVERCPECGNVY 149
>UniRef50_Q1EMP4 Cluster: Cytochrome c oxidase subunit 5b; n=1;
Plantago major|Rep: Cytochrome c oxidase subunit 5b -
Plantago major (Common plantain)
Length = 162
Score = 52.8 bits (121), Expect = 6e-06
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 113 SVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLV 292
S L G K D + TG ER+EL A G D + + GT+E P +V
Sbjct: 41 SFALFNTESGNVAKRPEDVIPIVTGHEREELQAELQGKDI-LEINYPEGPFGTKEEPAVV 99
Query: 293 PSCFDARIVGC--ICEEHATAITWLWLHKDQPRRCE-CGHWY 409
S +D RIVGC E + W WL K +P C C ++
Sbjct: 100 KSYYDKRIVGCPGADGEDEHDVVWFWLEKGKPHECPVCSQYF 141
>UniRef50_Q2UEE5 Cluster: Cytochrome c oxidase; n=1; Aspergillus
oryzae|Rep: Cytochrome c oxidase - Aspergillus oryzae
Length = 208
Score = 52.4 bits (120), Expect = 8e-06
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +2
Query: 158 MPDPLEHATGLERKELLALQAGNDDPFNMKVVKKS-AGTRENPTLVPSCFDARIVGCI-C 331
+P +E ATGLER EL+ G D F+M+ + S GT ENP +V D + GC
Sbjct: 66 VPSDIEQATGLERLELVGKMQG-IDIFDMRPLDASRKGTLENPIIVNGAGDEQYAGCTGF 124
Query: 332 EEHATAITWLWLHKDQP-RRC-ECGH 403
+ + WL + +D+P RC ECG+
Sbjct: 125 PADSHTVNWLTVSRDRPIERCGECGN 150
>UniRef50_A7P5P3 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 194
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 266 GTRENPTLVPSCFDARIVGCICEEHATA--ITWLWLHKDQPRRC 391
GT+E P +V S +D RIVGC E + W WLHKDQP C
Sbjct: 130 GTKEAPAIVKSFYDRRIVGCPGGEGEDEHDVVWFWLHKDQPHVC 173
>UniRef50_Q5DFC5 Cluster: SJCHGC06267 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06267 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +2
Query: 167 PLEHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVG-CICEEHA 343
P++ +KELL + + + +K S+ +E+P LV SC D R V C C H
Sbjct: 57 PVKSKLSQLQKELLWEVSQAEPAIDHGKIKPSS--KEDPNLV-SCSDIRSVQMCHCSPHD 113
Query: 344 TAITWLWLHKDQPRRCECGHWYXXXXXXXXXXXXXXVYYQVVLQPKQNASWLSR 505
+ +L L+++ P RC CG+W+ + ++ +P +NA L R
Sbjct: 114 RYVNYLVLYRNLPTRCFCGNWFLLVDEQRYEEEREKKWNKIKSEP-ENADLLKR 166
>UniRef50_A5DU86 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial; n=5; Saccharomycetales|Rep: Cytochrome c
oxidase polypeptide IV, mitochondrial - Lodderomyces
elongisporus (Yeast) (Saccharomyces elongisporus)
Length = 158
Score = 45.6 bits (103), Expect = 0.001
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +2
Query: 113 SVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKV-VKKSAGTRENPTL 289
S+I P A+ G +P + ATGL+R ELL + G D F+M++ + + GT E+P L
Sbjct: 50 SLIGPGAKPG----TIPTDFDQATGLQRLELLGKKEGVD-VFDMEMPITEGKGTMEDPFL 104
Query: 290 VPSCFDARIVGCI-CEEHATAITWLWLHKDQPRRC-ECG 400
VP+ R VGC E W+ + + RC CG
Sbjct: 105 VPTYIGYRYVGCKGTAEVDHKPYWMKVEEGHVSRCWRCG 143
>UniRef50_P04037 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor; n=4; Saccharomycetales|Rep:
Cytochrome c oxidase polypeptide IV, mitochondrial
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 45.6 bits (103), Expect = 0.001
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +2
Query: 83 RQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKS 262
+ + N ++I P A+ G +P L+ TGL R ELL G D F+ K + S
Sbjct: 35 QNLAEVNGPETLIGPGAKEG----TVPTDLDQETGLARLELLGKLEG-IDVFDTKPLDSS 89
Query: 263 -AGTRENPTLVPSCFDARIVGCICEEHAT-AITWLWLHKDQPRRC-ECGHWY 409
GT ++P ++ S D R VGC + I WL ++ RC ECG Y
Sbjct: 90 RKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVY 141
>UniRef50_Q9LW15 Cluster: Cytochrome c oxidase subunit Vb-like
protein; n=9; core eudicotyledons|Rep: Cytochrome c
oxidase subunit Vb-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 176
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +2
Query: 146 ADKMMPDPLEHATGLERKELLALQAGN--DDPFNMKVVKKSAGTRENPTLVPSCFDARIV 319
A K + D + ATG E++EL A G DD + + GT+E P +V S +D RIV
Sbjct: 64 ATKKVEDVMPIATGHEKEELEAELEGRRLDD---IDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 320 GCICEEHATA--ITWLWLHKDQPRRC 391
GC E + W WL K + C
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFEC 146
>UniRef50_Q01GC2 Cluster: Cytochrome c oxidase, subunit Vb/COX4;
n=2; Ostreococcus|Rep: Cytochrome c oxidase, subunit
Vb/COX4 - Ostreococcus tauri
Length = 202
Score = 41.5 bits (93), Expect = 0.016
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 170 LEHATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATA 349
LE+ATGL ++EL G D + ++ GT E+P +V S + R+VG + +
Sbjct: 33 LENATGLYKEELEGKLRGEDIFDHHAFLRAPQGTEESPCVVESTMEYRVVGSPDPDDDSI 92
Query: 350 ITWLWLHKDQPRRCECGHWY 409
I W L + P R W+
Sbjct: 93 IHWGRLEEGAPPRNIGSEWF 112
>UniRef50_Q6CS03 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 154
Score = 41.1 bits (92), Expect = 0.021
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 140 GYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKKS-AGTRENPTLVPSCFDARI 316
G D +P L+ ATGL R ELL G + F+ K + S GT ENP +V S D R
Sbjct: 50 GAKDGEVPTELDQATGLARLELLGKLEG-IEVFDTKPLDSSRIGTMENPIIVESYDDYRY 108
Query: 317 VGCICEEHAT-AITWLWLHKDQPRRC 391
VG + + WL Q RC
Sbjct: 109 VGATGSPAGSHNVMWLKPTDGQVARC 134
>UniRef50_Q5K8Q1 Cluster: Cytochrome c oxidase polypeptide iv,
mitochondrial, putative; n=3; Basidiomycota|Rep:
Cytochrome c oxidase polypeptide iv, mitochondrial,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 212
Score = 38.3 bits (85), Expect = 0.14
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 158 MPDPLEHATGLERKELLALQAGNDDPFNMKVVK-KSAGTRENPTLVPSCFDARIVGCI-- 328
+P+ +TGLER ELL G D F+MK ++ GT + P + S F R +GC
Sbjct: 108 VPNDENQSTGLERFELLGNLEG-VDVFDMKPLEITRLGTVDEPIPIYSLFPERQIGCTGF 166
Query: 329 -CEEHATAITWLWL-HKDQPRRC-ECGHWY 409
+ H T WL + H + RC ECG Y
Sbjct: 167 PVDSHDT--IWLNVNHTLKNHRCPECGSVY 194
>UniRef50_A5B9Z5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 110
Score = 36.3 bits (80), Expect = 0.58
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 272 RENPTLVPSCFDARIVGCICEEHATA--ITWLWLHKDQPRRCE-CGHWY 409
RE P +V S +D RIVGC E + W WL K + C C ++
Sbjct: 17 REAPAVVQSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQYF 65
>UniRef50_Q28KY0 Cluster: NADH dehydrogenase; n=8;
Proteobacteria|Rep: NADH dehydrogenase - Jannaschia sp.
(strain CCS1)
Length = 952
Score = 33.1 bits (72), Expect = 5.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 273 VKTQLWYLPALMLVLLDAFVKNTLQP 350
++ WYLPAL+L+LL AF K+ P
Sbjct: 205 IRASEWYLPALILILLGAFTKSAQFP 230
>UniRef50_Q1BYJ1 Cluster: Methyltransferase FkbM; n=2; Burkholderia
cenocepacia|Rep: Methyltransferase FkbM - Burkholderia
cenocepacia (strain AU 1054)
Length = 1644
Score = 33.1 bits (72), Expect = 5.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 113 SVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDP 235
S+++PT + +M + L HAT KE++ + G+DDP
Sbjct: 708 SIVIPTKNKPELLRMCLEGLLHATDYPNKEVVIVDTGSDDP 748
>UniRef50_Q7NJ59 Cluster: Glr1973 protein; n=3; Cyanobacteria|Rep:
Glr1973 protein - Gloeobacter violaceus
Length = 747
Score = 32.3 bits (70), Expect = 9.5
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 212 LQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKD 376
LQA N+ PF + V AGTREN + + F AR+ + E A + + L +KD
Sbjct: 292 LQANNNFPFEIASVGY-AGTRENADVTYNNFSARLEADLSERTALSASVLSQNKD 345
>UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13;
Eutheria|Rep: E3 SUMO-protein ligase CBX4 - Homo sapiens
(Human)
Length = 558
Score = 32.3 bits (70), Expect = 9.5
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 80 CRQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNMKVVKK 259
C++ L A RS+ PT G P L A L + E++ L + D+P +++ VK
Sbjct: 422 CKKRLTA---RSISTPTCLGGSPAAERPADLPPAAALRQPEVILLDSDLDEPIDLRSVKS 478
Query: 260 SAGTRENPT 286
+ E P+
Sbjct: 479 RSEAGEPPS 487
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,003,571
Number of Sequences: 1657284
Number of extensions: 13917143
Number of successful extensions: 30811
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30797
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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