Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P21
(539 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 148 6e-37
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 145 3e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 108 6e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 1e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 50 2e-07
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.005
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.047
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.082
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 30 0.19
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.19
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.19
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.33
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.44
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.58
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.0
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.0
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.8
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.8
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 2.3
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.3
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.1
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.1
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.1
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.1
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.1
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 4.1
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.1
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 5.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 5.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 5.4
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 7.2
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 7.2
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 7.2
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 9.5
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 9.5
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 25 9.5
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 9.5
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 148 bits (358), Expect = 6e-37
Identities = 67/112 (59%), Positives = 88/112 (78%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
ITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+
Sbjct: 499 ITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKD 558
Query: 182 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 337
K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 559 KVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 145 bits (352), Expect = 3e-36
Identities = 66/112 (58%), Positives = 88/112 (78%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
ITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+
Sbjct: 499 ITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKD 558
Query: 182 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 337
K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 559 KVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 108 bits (259), Expect = 6e-25
Identities = 51/113 (45%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLK 178
+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L
Sbjct: 529 LVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLG 588
Query: 179 EKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNPIITKMY 334
K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 589 GKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.4 bits (125), Expect = 1e-08
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 182 KISDSDKQTI---LDKCNDTIKWLDSN 253
K+ DK I L +C ++ D+N
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 50.0 bits (114), Expect = 2e-07
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKL 175
IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL
Sbjct: 542 ITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKL 600
Query: 176 KEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 337
++ + + I D K ++ E+ + K E++ + + +Y+
Sbjct: 601 DQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.005
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 172
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 173 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 319
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.047
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 217
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 218 K 220
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.082
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 199
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 200 KQTILDKCNDTIK 238
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.3 bits (65), Expect = 0.19
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 20 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 190
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 191 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQXCRRSPRRYAG 370
D D++ DT+ D NQ+ D+ E K+ + E + P + + + P R G
Sbjct: 281 DKDQE------QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTTSPILPPKNQEPIRMGG 331
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.19
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 196
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 197 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 295
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.19
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = +2
Query: 32 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 211
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 212 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 301
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.33
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 8 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 187
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 188 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEGICN 313
D++++ D +K+ L + EY +QK + E I N
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQKRKADAEAIAN 534
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDD 91
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.58
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 176 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 301
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 215 DKCNDTIKWLDSNQLADKEEYEHKQK 292
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.0
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 47 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC- 223
E ++EK ++ K + KNA ++ M DE+ E S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 224 NDTIKWLDSNQLADKEEYEHKQKE 295
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 182 KISDSDKQTILDKCNDTIK 238
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 53 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 157
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 2.3
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = +2
Query: 56 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 235
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 236 KWLDSNQLADKEEYEHKQKELEGICNPI 319
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 83 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 244
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 187
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 188 SDSDKQTILDKCND 229
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 208
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 14 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 190
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 191 DSDKQT 208
+D+ T
Sbjct: 695 -TDRLT 699
Score = 26.2 bits (55), Expect = 3.1
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 26 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 202
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 203 QTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 295
+T + + K L +N+L+ E +H +KE
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKE 1041
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.1
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 178
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 179 EKISDSDKQTILDKC 223
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 32 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 154
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 130
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 86 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 262
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 263 DK 268
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 215 D 217
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 215 DKC 223
D C
Sbjct: 754 DGC 756
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 5.4
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 5 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 184
T D SKEE+E +V E E D +Q + K+ L++ F ++ KLK+K
Sbjct: 535 TQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNRKLKKK 585
Query: 185 ISD 193
S+
Sbjct: 586 ASN 588
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 116 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 241
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 163
+TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 291 MTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 385 HPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTS 507
H +P +L+PPS R++KP H+ P+ + L S
Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEPS 208
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 7.2
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 29 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 199
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 7.2
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = +2
Query: 17 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 166
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 167 ---EKLKEKISDSDKQTILDKCND 229
EK++EK+++ DK ++ D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +2
Query: 17 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 196
DK + E+I + ++Y NED+ + +++ A S+ ++ +T++ + KI +S
Sbjct: 399 DKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTIQAKYSNRKIKNS 457
Query: 197 D 199
+
Sbjct: 458 N 458
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 196
+G + + E E EAE ++ ++D+ ++E ++ L S S E+E+ E SD
Sbjct: 194 EGLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDE 253
Query: 197 DK 202
D+
Sbjct: 254 DE 255
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 9.5
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 56 VNEAEKYRNEDDKQK-ETI----QAKNALE-SYCFSMKSTME-DEKLKEKISDSDKQTIL 214
V E K R+ED+ QK ET+ + K +E S+ S + E +K++ S+ K +
Sbjct: 463 VEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVKKEPSEEKKLEVS 522
Query: 215 DKCNDTIKWLDSNQLADKEE-YEHKQKE 295
D+ +S ++ +KE Y K K+
Sbjct: 523 DEAPKAAPLAESKKVEEKEPFYVSKDKK 550
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 143 SMKSTMEDEKLKEKISD 193
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,915,453
Number of Sequences: 5004
Number of extensions: 34923
Number of successful extensions: 211
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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