Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P20
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 34 0.072
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.095
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.095
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 31 0.51
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.67
At3g28770.1 68416.m03591 expressed protein 31 0.67
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.88
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.0
At2g22795.1 68415.m02704 expressed protein 29 2.0
At3g05110.1 68416.m00555 hypothetical protein 29 3.6
At1g47900.1 68414.m05334 expressed protein 29 3.6
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 4.7
At3g26050.1 68416.m03244 expressed protein 28 4.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 4.7
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 4.7
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 4.7
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 28 6.2
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 28 6.2
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.2
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.2
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 8.2
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 8.2
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 27 8.2
At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger) fa... 27 8.2
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 396 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 575
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 576 AEFNFRN-QLKVVKKKEFTLEEEDKEK 653
+ R +L+ + K+ L+EE + K
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTK 961
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 339 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 518
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 519 TLKKVSKYENKF 554
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 339 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 518
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 519 TLKKVSKYENKF 554
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 31.5 bits (68), Expect = 0.51
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 339 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 503
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 504 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEK 653
K LK+ +KF++ QK ++F ++L +++KK L E+ + K
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMK 334
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +3
Query: 357 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 536
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 537 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEK 653
+ + F L +K AE N NQ +++++ E ++ K
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARK 316
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.1 bits (67), Expect = 0.67
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 339 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 515
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 516 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEK 653
+ + K E + + ++K + N + +KK+ ++EE K+K
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQK 1225
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 396 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 575
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 576 AEFNFRNQLKVVKK 617
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 333 KPKNIDDANEDTIKRVCKDYHERIARLED 419
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 351 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 527
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 528 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEK 653
+ K E + A Q+++ E N+ + +K+E + +EE KEK
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEK 580
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +3
Query: 429 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 608
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 609 VKKKEFTLEEEDKEK 653
K+KE L++ ++
Sbjct: 95 EKEKELELKQRQVQE 109
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 384 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 554
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 555 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 638
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 286 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 447
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 447 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 623
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 624 FTLEEEDKEK 653
F + E+K K
Sbjct: 415 FFKKVEEKNK 424
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 343 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 462
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +3
Query: 429 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 608
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 609 VKKKEFTLEE 638
+ + TLE+
Sbjct: 1445 AQNRRLTLED 1454
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 402 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 572
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 573 AAEFNFRNQLKVVKKKEFT-LEEE 641
A + +Q K + ++ L+EE
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEE 200
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 27.9 bits (59), Expect = 6.2
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Frame = +3
Query: 348 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 521
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 522 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEK 653
LK V + L+++ +E N ++Q++V +E T E ++ +K
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQK 158
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 27.9 bits (59), Expect = 6.2
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Frame = +3
Query: 348 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 521
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 522 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEK 653
LK V + L+++ +E N ++Q++V +E T E ++ +K
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQK 286
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 444 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 581
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 363 DTIKRVCKDYHERIARLEDEKFDLEYIV 446
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 441 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 617
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 618 KEFTLEEEDKE 650
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 441 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 617
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 618 KEFTLEEEDKE 650
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +3
Query: 429 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 608
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 609 VKKKEFTLEE 638
+ + TLE+
Sbjct: 1397 AQNRRLTLED 1406
>At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 240
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 192 FWLWRXXXXXXXPQRASGRFRPVWPDFA 109
+W+WR +R G F P+W F+
Sbjct: 137 YWVWRIDPSYRQEERERGCFSPLWVAFS 164
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,013,922
Number of Sequences: 28952
Number of extensions: 181243
Number of successful extensions: 701
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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