Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P19
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   3.8  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.7  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 507 FSCIKTKSKNPEAPRGG 457
           F  +KT+S +PEA  GG
Sbjct: 19  FVVVKTRSNSPEAGGGG 35


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 507 FSCIKTKSKNPEAPRGG 457
           F  +KT+S +PEA  GG
Sbjct: 19  FVVVKTRSNSPEAGGGG 35


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 638 CNXSIFHVLKVTKQNPRERPV 576
           CN    HV+ + ++  R RP+
Sbjct: 169 CNEFTTHVMNLLREQSRTRPI 189


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -3

Query: 626 IFHVLKVTKQNPRERPVFASITTCTLSTGPYLEKIW 519
           + HVL+     P+  P FA I  C         KIW
Sbjct: 46  VIHVLQYPGCVPKPIPSFACIGRCASYIQVSGSKIW 81


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 195 RRFRYRLARTVASPRTTSLSIRHSDV 118
           RR+R+R+  + AS     L+I+  D+
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 195 RRFRYRLARTVASPRTTSLSIRHSDV 118
           RR+R+R+  + AS     L+I+  D+
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 102 SLINYEHRYV*SREKSFEDSQRFSR 176
           S ++ EH YV  R   F DS + S+
Sbjct: 33  SFVHKEHCYVLVRLARFRDSVKLSK 57


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 561 NLHFVNGSILRKDMVYLLFSCI 496
           NL  + G  +RK++ YLL   I
Sbjct: 86  NLKLLKGRKIRKNLYYLLLFVI 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,521
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)