Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P19
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.5  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.7  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 130  SDRERSRSRTRNGSR 174
            S R RSRSR+R+GSR
Sbjct: 1160 SRRSRSRSRSRSGSR 1174


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 552 FVNGSILRKDMVYLLFSCIKTKSKNPEAPR 463
           F + S +R  M     SCI   SK  EAPR
Sbjct: 110 FYSKSFVRHSMEATAMSCICLASKIEEAPR 139


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 552 FVNGSILRKDMVYLLFSCIKTKSKNPEAPR 463
           F + S +R  M     SCI   SK  EAPR
Sbjct: 110 FYSKSFVRHSMEATAMSCICLASKIEEAPR 139


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 585  FPRVLLRYFEDMED 626
            FP ++ +YFED ED
Sbjct: 1057 FPSLVKKYFEDFED 1070


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,182
Number of Sequences: 2352
Number of extensions: 10412
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)