Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P17
         (451 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234...    29   2.3  
01_06_1124 - 34679205-34680926,34681438-34682811                       28   3.0  
02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722           28   4.0  
05_07_0213 + 28443724-28443775,28443901-28444007,28444757-284456...    27   5.3  
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875...    27   5.3  
11_06_0461 + 23856949-23857004,23859814-23859886,23860040-23861398     27   7.0  
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173...    27   9.2  

>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
            2343027-2343236,2343436-2343654,2344038-2345000,
            2345279-2345374,2345482-2345580,2345953-2346142,
            2346594-2346823
          Length = 1358

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 180  GNGISGNDKIQKFLMDLPASNHTLKSL 260
            G G  G+D++  F MD+PA+   +K L
Sbjct: 1314 GGGTGGSDQVTSFQMDVPATMPAVKEL 1340


>01_06_1124 - 34679205-34680926,34681438-34682811
          Length = 1031

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 273 ISDVLVANKLTYLIQACGDVTY 338
           +SD+ V+N L +L  ACG++ Y
Sbjct: 584 LSDIFVSNSLIHLYAACGNLCY 605


>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
          Length = 1155

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 213 KFLMDLPASNHTLKSLDAQPISDVLVANKLTYLIQACGDVTYQN 344
           K   +LP+    LK+LD   +SD  ++ K+   I  C  + Y N
Sbjct: 645 KLTGNLPSEVGNLKNLDELDLSDNTISGKIPTTIGECQSLQYLN 688


>05_07_0213 +
           28443724-28443775,28443901-28444007,28444757-28445644,
           28445760-28445762,28446006-28446398
          Length = 480

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 268 NQYLMSWLQIN*RTSSKLVEMLLIKTKKQRNHFSKLFS 381
           ++YL SWLQ+  +   + + ++L KTK++ N    L S
Sbjct: 138 SRYLDSWLQVVVKPGIEELTLVLCKTKREYNFPCSLLS 175


>04_04_1189 +
           31586991-31587291,31587358-31587397,31587449-31587534,
           31587535-31588097,31588250-31589913,31589956-31590066,
           31590152-31591181,31591234-31591406,31591535-31591814,
           31592275-31592331
          Length = 1434

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +3

Query: 111 KQVDNSRHLTSKLYLDTGLLVWNGNGISGNDKIQKFLMDLPASNHTLKSLDAQPISD 281
           K   +   L  K YL    L WNG  +S      K +++    +H LK+L     SD
Sbjct: 758 KDEASGARLIDKEYLKKLSLSWNGGSVSLEPDRSKDVLEGLRPHHNLKTLSITGYSD 814


>11_06_0461 + 23856949-23857004,23859814-23859886,23860040-23861398
          Length = 495

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 104 HSSKFFSCLTSTINIFYCYIKTYLYF 27
           H SK    LTS++N    Y   YLYF
Sbjct: 240 HKSKHLDTLTSSLNKLLSYNLRYLYF 265


>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
            32917396-32917552,32917695-32917753,32918180-32918291,
            32918901-32919050,32919180-32919316,32919977-32920123,
            32920197-32920298,32920674-32920731,32920840-32920941,
            32921905-32921942,32922031-32922157,32922228-32922401,
            32922542-32922628,32923838-32923947,32924654-32924714,
            32925338-32925515,32925628-32925833,32926108-32926227,
            32927202-32927423,32927708-32927847,32927976-32928087,
            32928254-32928304,32928384-32928473,32928630-32928800,
            32928897-32929049,32929860-32930036,32930131-32930268,
            32930363-32930433,32930837-32930936,32931156-32931212,
            32931301-32931357,32931451-32931531,32931614-32931696,
            32931831-32931966
          Length = 1459

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 201  DKIQKFLMDLPASNHTL--KSLDAQPISDVLVANK 299
            DK+Q+ L +L   NH L  K+L+  P++++ +A K
Sbjct: 967  DKLQEKLTNLENENHVLRQKALNMSPLNNMSMATK 1001


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,048,121
Number of Sequences: 37544
Number of extensions: 237939
Number of successful extensions: 543
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)