Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P15
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    27   0.13 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +1

Query: 247 SIPGNILKLSNLRM-KLFIILTLCALAAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQ 423
           S P +   L N R+ + F+  ++  L     +E T   + + +   PEE  +L       
Sbjct: 48  SKPVSFESLPNRRLHEEFLRSSVDVLLQEAVFEGTNRKNRVLQWREPEELRRLMDFGVRS 107

Query: 424 LPQTVEELVAELLKFIYNVVENGWPIF 504
            P T EEL+  L K +   V+ G P F
Sbjct: 108 APSTHEELLEVLKKVVTYSVKTGHPYF 134


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 481 VENGWPIFNLPPLEPLV 531
           V   W +F+ PP EP V
Sbjct: 28  VREKWNVFDDPPREPTV 44


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 481 VENGWPIFNLPPLEPLV 531
           V   W +F+ PP EP V
Sbjct: 28  VREKWNVFDDPPREPTV 44


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 288 EVIYHFDPLRPRGCETMGAYSPK*RYT 368
           E I++ +   P GC+  G +    +YT
Sbjct: 204 EEIFNGNRANPNGCQIRGTFFVSHKYT 230


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 288 EVIYHFDPLRPRGCETMGAYSPK*RYT 368
           E I++ +   P GC+  G +    +YT
Sbjct: 211 EEIFNGNRANPNGCQIRGTFFVSHKYT 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,175
Number of Sequences: 336
Number of extensions: 2917
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)