Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P15
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0713 - 5438005-5438294,5438441-5438567,5438638-5438687,543... 30 1.9
08_01_0601 - 5268520-5271112,5272448-5272950 29 2.4
07_03_0955 + 22867448-22868248 29 2.4
11_01_0327 - 2446949-2446999,2447060-2447299,2447542-2447813,244... 29 3.2
12_01_0740 + 6646471-6649407 29 4.3
12_01_0722 + 6355972-6359031 29 4.3
02_05_1094 + 34060262-34060385,34061256-34061428,34061505-340616... 29 4.3
08_02_0017 - 11264038-11264260,11264376-11264653 28 7.5
02_03_0201 + 16302797-16302799,16303949-16304084,16304163-163042... 28 7.5
12_01_0419 - 3316866-3318172,3318249-3318360 27 9.9
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 27 9.9
06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652 27 9.9
05_07_0062 + 27423081-27423287,27423372-27423449,27423548-274235... 27 9.9
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 27 9.9
>07_01_0713 -
5438005-5438294,5438441-5438567,5438638-5438687,
5439119-5439426,5439581-5439673,5439840-5440197,
5440235-5440267,5440324-5440482,5440734-5440908
Length = 530
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 LCALAAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAE-LLKFIYNVVE 486
L A AAA P + DV+P+P P EP L+ P LP L E L + +E
Sbjct: 461 LPAAAAAGPQDLPEAGDVLPQPHQP-EPHHLQD--APDLPAAGNPLQPEPHLLQVQAPLE 517
Query: 487 NGWPIFNLPPLEP 525
N P F PP +P
Sbjct: 518 N--PPFAGPPHQP 528
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 259 NILKLSNLRMKLFIILTLCALAAAKPWEHTV--LNDVIPEPSAPEE-PPQLESL 411
++ K SNL + + ++ L W+ + L+D P P++PE+ PP+ +SL
Sbjct: 391 SMTKGSNLPLNIVMLAGLLRSKKEDEWDAVIHSLDDTPPPPTSPEQMPPEKDSL 444
>07_03_0955 + 22867448-22868248
Length = 266
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/70 (21%), Positives = 27/70 (38%)
Frame = +1
Query: 343 HTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAELLKFIYNVVENGWPIFNLPPLE 522
H +L +++P + QL H P LP + L + + + + + P
Sbjct: 27 HLLLPNLLPSAATAASDAQLHHFHLPALPSPITVRTLPSLGLTFQLWPSASTLLRVLPAS 86
Query: 523 PLVLEYFELP 552
PL+L P
Sbjct: 87 PLLLSRAPTP 96
>11_01_0327 -
2446949-2446999,2447060-2447299,2447542-2447813,
2447917-2447956,2448057-2448134,2448212-2448271,
2448434-2448493,2449620-2449766,2449921-2450018,
2450455-2450582,2451275-2451321
Length = 406
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 520 QEEED*KLASHSPLHCK*TSRVLQPALLRSVA 425
Q+E+ K+A++SP H T + L P +R +A
Sbjct: 135 QQEQHKKMATNSPTHSSKTGKALDPKTMRRLA 166
>12_01_0740 + 6646471-6649407
Length = 978
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 466 FIYNVVENGWPIFNLPPLEPLVLEYFELPIN 558
F+ N+ N + PL PL +EYF+L N
Sbjct: 524 FLLNLSHNNFTSIGSNPLLPLYIEYFDLSFN 554
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 466 FIYNVVENGWPIFNLPPLEPLVLEYFELPIN 558
F+ N+ N + PL PL +EYF+L N
Sbjct: 565 FLLNLSHNNFTSIGSNPLLPLYIEYFDLSFN 595
>02_05_1094 +
34060262-34060385,34061256-34061428,34061505-34061686,
34061789-34062073,34062160-34062218,34062349-34062385,
34062485-34062556,34063613-34063937,34064027-34064410
Length = 546
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 AKPWEHTVLNDVIP--EPSAPEEPPQLESLHTPQLPQTVEELVAEL 459
A P EHT L+D+IP EP+ E T QL V +++ +
Sbjct: 325 AHPTEHTALDDIIPCVEPATANESLYRSRQVTYQLVNLVNQVITNV 370
>08_02_0017 - 11264038-11264260,11264376-11264653
Length = 166
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 322 AAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEE 444
AA W H +++ P+P+AP PP + L P P EE
Sbjct: 120 AALDAWPHGPVSN--PQPAAPCSPPSVTPLGVP--PMVTEE 156
>02_03_0201 +
16302797-16302799,16303949-16304084,16304163-16304250,
16305531-16305683,16306647-16306809,16306906-16307090,
16307164-16307337,16308055-16308200,16308369-16308492,
16308608-16308788,16309302-16309371,16310155-16310196,
16310276-16310394,16310474-16310672,16311442-16311573,
16312435-16312538,16312641-16312820,16314000-16314090,
16314100-16314139,16314225-16314364,16314500-16314660,
16314897-16315020,16315104-16315255
Length = 968
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 504 ENWPAILHYIVNELQEFCNQLFYGLWQL 421
E WP +LH++ + L E NQ+F L+ L
Sbjct: 93 EQWPVLLHWVTHNL-ESENQIFGALYVL 119
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 367 PEPSAPEEPPQLESLHTPQLPQT 435
PEP A EEPP E PQ P+T
Sbjct: 340 PEPPAAEEPPAAEPEQEPQ-PET 361
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 620 RFPKPKAMASFNLSSTLIIPALIGSSKYSRTKGSRGGR 507
R P P A AS +S L P + G R G+ GGR
Sbjct: 480 RLPPPVAAASSRRASHLWFPDVTGKRACLRAHGAYGGR 517
>06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652
Length = 717
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +1
Query: 364 IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLKFIYNVVENGWPIFNLPPLEPLVLEYF 543
+P P P PP S+ T L Q ++A L I N ++ P PP + E+
Sbjct: 202 LPPPPPPPPPPDTNSILTQILAQQA-NMMAAFLHHIQNPPQHNAPPPPPPPQHSKLAEFL 260
Query: 544 EL 549
+
Sbjct: 261 RI 262
>05_07_0062 +
27423081-27423287,27423372-27423449,27423548-27423597,
27423714-27423767,27423965-27424017,27424101-27424173,
27424718-27424767,27424919-27424987,27425183-27425291,
27425658-27425725,27425982-27426082,27426260-27426412,
27426503-27426570,27426898-27426943,27427027-27427107
Length = 419
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 267 EAVQFKDEVIYHFDPLRPRGCETMGAYSPK 356
E ++F E+ YH + + P G T G YS +
Sbjct: 380 EKLKFPSEIPYHQELIPPNGTLTFGEYSER 409
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 371 NPQHRKSPHSLSPSTLHNCHRP*K 442
NP+ KS HSLSP T RP K
Sbjct: 401 NPKRTKSTHSLSPPTQWGGQRPQK 424
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,428,835
Number of Sequences: 37544
Number of extensions: 308808
Number of successful extensions: 1114
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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