Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P15
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical p... 33 0.23
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 33 0.23
U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical ... 28 5.0
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 28 5.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.8
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 27 8.8
>U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical
protein C06A5.8b protein.
Length = 215
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 373 PSAPEEPPQLESLHTPQLPQTVEELVAE 456
P PEEPP ++ PQL QT++EL+ E
Sbjct: 44 PEKPEEPPMKQAAQ-PQLEQTIDELIDE 70
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 373 PSAPEEPPQLESLHTPQLPQTVEELVAE 456
P PEEPP ++ PQL QT++EL+ E
Sbjct: 112 PEKPEEPPMKQAAQ-PQLEQTIDELIDE 138
>U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical
protein B0261.1 protein.
Length = 779
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 340 EHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
E V+ +V P+P+ P E++ +PQ+V ++V E+++
Sbjct: 628 EPVVVEEVAPDPTPPPPENMEENVVEESVPQSVIDVVEEIMR 669
>AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical
protein Y14H12B.1b protein.
Length = 217
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 319 LAAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAELLKFIYNVVE 486
+A+ K + + PE A EP + + ++ + E + KF+YN+VE
Sbjct: 69 VASRKSTQKKAKKEKTPEKEATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 124
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 319 LAAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAELLKFIYNVVE 486
+A+ K + + PE A EP + + ++ + E + KF+YN+VE
Sbjct: 102 VASRKSTQKKAKKEKTPEKEATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 157
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 378 STGRA-PTA*VPPHSTTATDRRRAGCRTLEVHLQCSGEWLAN 500
ST A PT VP +T AT R R QC+G W+ N
Sbjct: 1214 STSTAVPTTTVPVTTTIATTTRVTTVRPTVGPCQCTGRWVYN 1255
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5293 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5338
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5434 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5479
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5293 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5338
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5454 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5499
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5293 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5338
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 KPWEHTVLNDV-IPEPSAPEEPPQLESLHTPQLPQTVEELVAELLK 465
+P E DV +PE SAP P +E L + + +T E AE+++
Sbjct: 5454 EPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIE 5499
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 322 AAAKPWEHTVLNDVIPEPSAPEEPPQLESLHTPQLPQTVEELVAELLKFIYNVVEN 489
A A+ E NDVI + PP LES + Q ++ L+ ++ + VEN
Sbjct: 359 AEAEEEEEEAENDVIEGEYEDDGPPVLESFGNVSIQQPIQHLIMMEEQWSEDEVEN 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,211,895
Number of Sequences: 27780
Number of extensions: 265885
Number of successful extensions: 1048
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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