Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P15
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g58140.4 68418.m07274 protein kinase family protein / non pho...    30   1.2  
At5g58140.3 68418.m07277 protein kinase family protein / non pho...    30   1.2  
At5g58140.2 68418.m07276 protein kinase family protein / non pho...    30   1.2  
At5g58140.1 68418.m07275 protein kinase family protein / non pho...    30   1.2  
At5g06839.1 68418.m00773 bZIP family transcription factor contai...    27   8.2  

>At5g58140.4 68418.m07274 protein kinase family protein / non
           phototropic hypocotyl 1-like protein (NPL1) contains
           Pfam domains, PF00069: Protein kinase domain and
           PF00785:  PAC motif; similar to SP:O48963 Nonphototropic
           hypocotyl protein 1           (Phototropin) [Mouse-ear
           cress] {Arabidopsis thaliana}; identical to cDNA non
           phototropic hypocotyl 1-like (NPL1) GI:5391441
          Length = 689

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 240 KELDTWKYIEAVQFKDEVI--YHFDPLRPRGCETMGA 344
           KE  +WK I+ +Q   E +  +HF P++P G    G+
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGS 590


>At5g58140.3 68418.m07277 protein kinase family protein / non
           phototropic hypocotyl 1-like protein (NPL1) contains
           Pfam domains, PF00069: Protein kinase domain and
           PF00785:  PAC motif; similar to SP:O48963 Nonphototropic
           hypocotyl protein 1           (Phototropin) [Mouse-ear
           cress] {Arabidopsis thaliana}; identical to cDNA non
           phototropic hypocotyl 1-like (NPL1) GI:5391441
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 240 KELDTWKYIEAVQFKDEVI--YHFDPLRPRGCETMGA 344
           KE  +WK I+ +Q   E +  +HF P++P G    G+
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGS 590


>At5g58140.2 68418.m07276 protein kinase family protein / non
           phototropic hypocotyl 1-like protein (NPL1) contains
           Pfam domains, PF00069: Protein kinase domain and
           PF00785:  PAC motif; similar to SP:O48963 Nonphototropic
           hypocotyl protein 1           (Phototropin) [Mouse-ear
           cress] {Arabidopsis thaliana}; identical to cDNA non
           phototropic hypocotyl 1-like (NPL1) GI:5391441
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 240 KELDTWKYIEAVQFKDEVI--YHFDPLRPRGCETMGA 344
           KE  +WK I+ +Q   E +  +HF P++P G    G+
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGS 590


>At5g58140.1 68418.m07275 protein kinase family protein / non
           phototropic hypocotyl 1-like protein (NPL1) contains
           Pfam domains, PF00069: Protein kinase domain and
           PF00785:  PAC motif; similar to SP:O48963 Nonphototropic
           hypocotyl protein 1           (Phototropin) [Mouse-ear
           cress] {Arabidopsis thaliana}; identical to cDNA non
           phototropic hypocotyl 1-like (NPL1) GI:5391441
          Length = 915

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 240 KELDTWKYIEAVQFKDEVI--YHFDPLRPRGCETMGA 344
           KE  +WK I+ +Q   E +  +HF P++P G    G+
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGS 590


>At5g06839.1 68418.m00773 bZIP family transcription factor contains
           Pfam profile: PF00170 bZIP transcription factor
          Length = 417

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 338 GSIQS*MTLYLNPQHRKSPHSLSPSTLHNCH 430
           G I   + LYL+ Q    P S +PS LH+ H
Sbjct: 33  GEIDPSLFLYLDGQGHHDPPSTAPSPLHHHH 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,196
Number of Sequences: 28952
Number of extensions: 248640
Number of successful extensions: 762
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)