BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_P06 (651 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 95 6e-20 SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 35 0.066 SB_59132| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12 SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 33 0.15 SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20 SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 32 0.35 SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81 SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 31 0.81 SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 30 1.4 SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 29 2.5 SB_23359| Best HMM Match : I-set (HMM E-Value=0) 29 3.3 SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0) 29 4.3 SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) 28 5.7 SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 >SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) Length = 348 Score = 94.7 bits (225), Expect = 6e-20 Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 MKVTVT + IF LDVS DLE+ENF+A E ESG PA +I+L+ +G L + KK+L + Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60 Query: 381 GVHDGDVIILLHMVNSAQNLSVNDSSQALPSG-IASLDFSNIQVP-TTSANTSMASRNTP 554 V + DVI+++ A++ + N + A PSG ++D+ IQ+P + T A P Sbjct: 61 SVKENDVILMVR--RQARHAARN--TVAPPSGQPMAIDWGQIQLPGNNQSRTQPAPSTAP 116 Query: 555 V----EEDPRIIREMFLANPDQLALLKQNNPRLAD 647 +E P IR+MFL +P Q+ ++ + AD Sbjct: 117 PPAANQESPEYIRDMFLNDPHQICFNQRELQKFAD 151 >SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) Length = 799 Score = 34.7 bits (76), Expect = 0.066 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Frame = +3 Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH---MVNSAQNLSVNDSSQALPSGI 479 P+ ITLH + P + +L +H V + I LH + N + ++++ S PSG Sbjct: 436 PSGTITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGT 495 Query: 480 ASLDFSNIQVPTTSANTSMASRNTPVEE 563 +LD N+ P+ + ++ N EE Sbjct: 496 INLDQHNVPNPSGTITSAFNVPNPSGEE 523 Score = 31.5 bits (68), Expect = 0.62 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Frame = +3 Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH------------MVNSAQNLSVND 452 P+ ITLH + P + +L +H V + I LH + N + ++++ Sbjct: 385 PSGTITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHNVPNPSDRHKVPNPSGTITLHQ 444 Query: 453 SSQALPSGIASLDFSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNN 632 + PSG +LD N VP S ++ N P + + + NP L Q+N Sbjct: 445 HNVPNPSGTITLDQHN--VPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGTINLDQHN 502 Score = 29.5 bits (63), Expect = 2.5 Identities = 27/98 (27%), Positives = 40/98 (40%) Frame = +3 Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLHMVNSAQNLSVNDSSQALPSGIASL 488 P+ ITLH + P + +L +H V + I LH N N S + PSG +L Sbjct: 334 PSGSITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHN-VPNPS-DRHKVPNPSGTITL 391 Query: 489 DFSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANP 602 N VP S ++ N P + + + NP Sbjct: 392 HQHN--VPNPSGTITLDQHNVPNPSGTITLHQHNVPNP 427 >SB_59132| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 119 Score = 33.9 bits (74), Expect = 0.12 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 585 MFLANPDQLALLKQNNPRLADA 650 MFL +P Q++LLK+ NP LADA Sbjct: 1 MFLNDPHQMSLLKERNPELADA 22 >SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) Length = 147 Score = 33.5 bits (73), Expect = 0.15 Identities = 21/82 (25%), Positives = 37/82 (45%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + +SV Sbjct: 60 NIQKESTLHLVLRLRGGMQISV 81 Score = 27.9 bits (59), Expect = 7.6 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +3 Query: 237 FVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIIL 410 F LDV +E+ K + G P K L + + L++N +SL ++ + G ++ L Sbjct: 88 FTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDN-RSLADYNIKQGSILHL 144 >SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 275 Score = 33.1 bits (72), Expect = 0.20 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%) Frame = +3 Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH---MVNSAQNLSVNDSSQALPSGI 479 P+ ITLH + P + +L +H V + I LH + N + ++++ S PSG Sbjct: 190 PSGTITLHQHNVPNASGTITLDQHNVPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGT 249 Query: 480 ASLDFSNIQVPT 515 +LD N+ P+ Sbjct: 250 INLDQHNVLNPS 261 >SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) Length = 142 Score = 32.3 bits (70), Expect = 0.35 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +3 Query: 198 TMKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKE 377 TM++ V TL L+V +EN KA + + G P L F GK L + ++L + Sbjct: 78 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSD 136 Query: 378 HGV 386 + + Sbjct: 137 YNI 139 >SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 533 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 60 NIQKESTLHLVLRLRGGMQIFV 81 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 135 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 136 NIQKESTLHLVLRLRGGMQIFV 157 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 211 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 212 NIQKESTLHLVLRLRGGMQIFV 233 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 287 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 288 NIQKESTLHLVLRLRGGMQIFV 309 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 363 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 364 NIQKESTLHLVLRLRGGMQIFV 385 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 439 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 440 NIQKESTLHLVLRLRGGMQIFV 461 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 515 Query: 381 GVHDGDVIILL 413 + + L+ Sbjct: 516 NIQKESTLHLV 526 >SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) Length = 381 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 60 NIQKESTLHLVLRLRGGMQIFV 81 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 135 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 136 NIQKESTLHLVLRLRGGMQIFV 157 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 211 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 212 NIQKESTLHLVLRLRGGMQIFV 233 Score = 31.1 bits (67), Expect = 0.81 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 287 Query: 381 GVHDGDVIILLHMVNSAQNLSV 446 + + L+ + + V Sbjct: 288 NIQKESTLHLVLRLRGGMQIFV 309 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 363 Query: 381 GVHDGDVIILL 413 + + L+ Sbjct: 364 NIQKESTLHLV 374 >SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 157 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = +3 Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380 M++ V TL L+V +EN KA + + G P L F GK L + ++L ++ Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59 Query: 381 GVHDGDVIILL 413 + + L+ Sbjct: 60 NIQKESTLHLV 70 >SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) Length = 533 Score = 30.3 bits (65), Expect = 1.4 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Frame = +3 Query: 204 KVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPA--KDITLHFNGKPLLNNKKSLKE 377 K V NDDI L+++ D + N K CE G P + I L N L + LK+ Sbjct: 6 KFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVDNDDVELQDWACLKD 65 Query: 378 HGVH 389 H Sbjct: 66 AATH 69 Score = 30.3 bits (65), Expect = 1.4 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Frame = +3 Query: 204 KVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPA--KDITLHFNGKPLLNNKKSLKE 377 K V NDDI L+++ D + N K CE G P + I L N L + LK+ Sbjct: 81 KFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVDNDDVELQDWACLKD 140 Query: 378 HGVH 389 H Sbjct: 141 AATH 144 >SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) Length = 744 Score = 29.5 bits (63), Expect = 2.5 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Frame = +3 Query: 198 TMKVTVTTLNDDIFVL-DVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLK 374 T +V +D+ L D++ D+ + K+ E+++G P LHF K L ++ +L Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDD-ATLA 63 Query: 375 EHGVHDGDVIILLHMVNSAQNLS----VNDSSQALPSGIASLDFSNIQ 506 + + G I+ + M ++ ++L D + +G+ LD S Q Sbjct: 64 KVNLKQG-CIVRIKMDSNYESLFDACWRGDLYEVFQNGVQFLDESEFQ 110 >SB_23359| Best HMM Match : I-set (HMM E-Value=0) Length = 367 Score = 29.1 bits (62), Expect = 3.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +3 Query: 288 CEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLHMVNS 428 C + +G P IT +G+P+ N + + H V +G+V+ + H +S Sbjct: 27 CAVNAGMPPPFITWSRDGQPINNTQDNSTAH-VIEGNVLKIAHAFDS 72 >SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 786 Score = 29.1 bits (62), Expect = 3.3 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +3 Query: 492 FSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNNPRLADA 650 +SN QV TS ++ T ++ +P++ R +NP +NP++ A Sbjct: 712 YSNPQVTRTSLYSNPQVTRTSLDSNPQVTRASLYSNPQVTRTSLDSNPQVTRA 764 >SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0) Length = 783 Score = 28.7 bits (61), Expect = 4.3 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 360 KKSLKEHGVHDGDVIILLHMVNSAQNLSVNDSSQALPSGIAS 485 KK +KEHG+ + +I + ++AQ L N+S + S I S Sbjct: 571 KKKVKEHGLRNSLLIAPMPTASTAQILGNNESIEPYTSNIYS 612 >SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) Length = 401 Score = 28.3 bits (60), Expect = 5.7 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 460 WLESLTLRFCAEFTM-CRRIITSPSWTPCSFNDFLLFRSGLP 338 W+ S + A+ + C R+ +WTPCS + ++ + P Sbjct: 55 WIHSSAAKSLAKTKLRCLRLSWKQAWTPCSLQETTIYTNNPP 96 >SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 237 FVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDG 395 F L + +L + K E + GF + +HF G L+ + +L + GV DG Sbjct: 20 FPLRIQLNLTVLRLKQLIEAQEGFGISEQEVHFQGNQLV-DALTLGQQGVLDG 71 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,091,103 Number of Sequences: 59808 Number of extensions: 409295 Number of successful extensions: 984 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 981 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1657237625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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