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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P06
         (651 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)              95   6e-20
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)              35   0.066
SB_59132| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.12 
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)                   33   0.15 
SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.20 
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)             32   0.35 
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)                   31   0.81 
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)                30   1.4  
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)                   29   2.5  
SB_23359| Best HMM Match : I-set (HMM E-Value=0)                       29   3.3  
SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0)             29   4.3  
SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)                      28   5.7  
SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  

>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
          Length = 348

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           MKVTVT  +  IF LDVS DLE+ENF+A  E ESG PA +I+L+ +G  L + KK+L  +
Sbjct: 1   MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60

Query: 381 GVHDGDVIILLHMVNSAQNLSVNDSSQALPSG-IASLDFSNIQVP-TTSANTSMASRNTP 554
            V + DVI+++     A++ + N  + A PSG   ++D+  IQ+P    + T  A    P
Sbjct: 61  SVKENDVILMVR--RQARHAARN--TVAPPSGQPMAIDWGQIQLPGNNQSRTQPAPSTAP 116

Query: 555 V----EEDPRIIREMFLANPDQLALLKQNNPRLAD 647
                +E P  IR+MFL +P Q+   ++   + AD
Sbjct: 117 PPAANQESPEYIRDMFLNDPHQICFNQRELQKFAD 151


>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
          Length = 799

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +3

Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH---MVNSAQNLSVNDSSQALPSGI 479
           P+  ITLH +  P  +   +L +H V +    I LH   + N +  ++++  S   PSG 
Sbjct: 436 PSGTITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGT 495

Query: 480 ASLDFSNIQVPTTSANTSMASRNTPVEE 563
            +LD  N+  P+ +  ++    N   EE
Sbjct: 496 INLDQHNVPNPSGTITSAFNVPNPSGEE 523



 Score = 31.5 bits (68), Expect = 0.62
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +3

Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH------------MVNSAQNLSVND 452
           P+  ITLH +  P  +   +L +H V +    I LH            + N +  ++++ 
Sbjct: 385 PSGTITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHNVPNPSDRHKVPNPSGTITLHQ 444

Query: 453 SSQALPSGIASLDFSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNN 632
            +   PSG  +LD  N  VP  S   ++   N P       + +  + NP     L Q+N
Sbjct: 445 HNVPNPSGTITLDQHN--VPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGTINLDQHN 502



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 27/98 (27%), Positives = 40/98 (40%)
 Frame = +3

Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLHMVNSAQNLSVNDSSQALPSGIASL 488
           P+  ITLH +  P  +   +L +H V +    I LH  N   N S +      PSG  +L
Sbjct: 334 PSGSITLHQHNVPNPSGTITLDQHNVPNPSGTITLHQHN-VPNPS-DRHKVPNPSGTITL 391

Query: 489 DFSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANP 602
              N  VP  S   ++   N P       + +  + NP
Sbjct: 392 HQHN--VPNPSGTITLDQHNVPNPSGTITLHQHNVPNP 427


>SB_59132| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 119

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +3

Query: 585 MFLANPDQLALLKQNNPRLADA 650
           MFL +P Q++LLK+ NP LADA
Sbjct: 1   MFLNDPHQMSLLKERNPELADA 22


>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
          Length = 147

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     +SV
Sbjct: 60  NIQKESTLHLVLRLRGGMQISV 81



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 237 FVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIIL 410
           F LDV     +E+ K   +   G P K   L +  + L++N +SL ++ +  G ++ L
Sbjct: 88  FTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDN-RSLADYNIKQGSILHL 144


>SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +3

Query: 309 PAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLH---MVNSAQNLSVNDSSQALPSGI 479
           P+  ITLH +  P  +   +L +H V +    I LH   + N +  ++++  S   PSG 
Sbjct: 190 PSGTITLHQHNVPNASGTITLDQHNVPNPSGTITLHQHNVPNPSGTITLHQHSVPNPSGT 249

Query: 480 ASLDFSNIQVPT 515
            +LD  N+  P+
Sbjct: 250 INLDQHNVLNPS 261


>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
          Length = 142

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 198 TMKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKE 377
           TM++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L +
Sbjct: 78  TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSD 136

Query: 378 HGV 386
           + +
Sbjct: 137 YNI 139


>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 533

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFV 81



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 135

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFV 157



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 211

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFV 233



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 287

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFV 309



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 363

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 364 NIQKESTLHLVLRLRGGMQIFV 385



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 439

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 440 NIQKESTLHLVLRLRGGMQIFV 461



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 515

Query: 381 GVHDGDVIILL 413
            +     + L+
Sbjct: 516 NIQKESTLHLV 526


>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
          Length = 381

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFV 81



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 135

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFV 157



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 211

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFV 233



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 287

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFV 309



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 363

Query: 381 GVHDGDVIILL 413
            +     + L+
Sbjct: 364 NIQKESTLHLV 374


>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59

Query: 381 GVHDGDVIILL 413
            +     + L+
Sbjct: 60  NIQKESTLHLV 70


>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
          Length = 533

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 204 KVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPA--KDITLHFNGKPLLNNKKSLKE 377
           K  V   NDDI  L+++ D  + N K  CE   G P   + I L  N    L +   LK+
Sbjct: 6   KFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVDNDDVELQDWACLKD 65

Query: 378 HGVH 389
              H
Sbjct: 66  AATH 69



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 204 KVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPA--KDITLHFNGKPLLNNKKSLKE 377
           K  V   NDDI  L+++ D  + N K  CE   G P   + I L  N    L +   LK+
Sbjct: 81  KFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVDNDDVELQDWACLKD 140

Query: 378 HGVH 389
              H
Sbjct: 141 AATH 144


>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
          Length = 744

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
 Frame = +3

Query: 198 TMKVTVTTLNDDIFVL-DVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLK 374
           T +V      +D+  L D++ D+ +   K+  E+++G P     LHF  K L ++  +L 
Sbjct: 5   TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDD-ATLA 63

Query: 375 EHGVHDGDVIILLHMVNSAQNLS----VNDSSQALPSGIASLDFSNIQ 506
           +  +  G  I+ + M ++ ++L       D  +   +G+  LD S  Q
Sbjct: 64  KVNLKQG-CIVRIKMDSNYESLFDACWRGDLYEVFQNGVQFLDESEFQ 110


>SB_23359| Best HMM Match : I-set (HMM E-Value=0)
          Length = 367

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 288 CEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDGDVIILLHMVNS 428
           C + +G P   IT   +G+P+ N + +   H V +G+V+ + H  +S
Sbjct: 27  CAVNAGMPPPFITWSRDGQPINNTQDNSTAH-VIEGNVLKIAHAFDS 72


>SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 492 FSNIQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNNPRLADA 650
           +SN QV  TS  ++     T ++ +P++ R    +NP        +NP++  A
Sbjct: 712 YSNPQVTRTSLYSNPQVTRTSLDSNPQVTRASLYSNPQVTRTSLDSNPQVTRA 764


>SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0)
          Length = 783

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 360 KKSLKEHGVHDGDVIILLHMVNSAQNLSVNDSSQALPSGIAS 485
           KK +KEHG+ +  +I  +   ++AQ L  N+S +   S I S
Sbjct: 571 KKKVKEHGLRNSLLIAPMPTASTAQILGNNESIEPYTSNIYS 612


>SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)
          Length = 401

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 460 WLESLTLRFCAEFTM-CRRIITSPSWTPCSFNDFLLFRSGLP 338
           W+ S   +  A+  + C R+    +WTPCS  +  ++ +  P
Sbjct: 55  WIHSSAAKSLAKTKLRCLRLSWKQAWTPCSLQETTIYTNNPP 96


>SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 237 FVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEHGVHDG 395
           F L +  +L +   K   E + GF   +  +HF G  L+ +  +L + GV DG
Sbjct: 20  FPLRIQLNLTVLRLKQLIEAQEGFGISEQEVHFQGNQLV-DALTLGQQGVLDG 71


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,091,103
Number of Sequences: 59808
Number of extensions: 409295
Number of successful extensions: 984
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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