Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_P06
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     31   0.032
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.51 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   4.8  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   8.4  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   8.4  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 31.1 bits (67), Expect = 0.032
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 59

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFV 81



 Score = 31.1 bits (67), Expect = 0.032
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 135

Query: 381 GVHDGDVIILLHMVNSAQNLSV 446
            +     + L+  +     + V
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFV 157



 Score = 30.7 bits (66), Expect = 0.042
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 201 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHFNGKPLLNNKKSLKEH 380
           M++ V TL      L+V     +EN KA  + + G P     L F GK  L + ++L ++
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 211

Query: 381 GVHDGDVIILL 413
            +     + L+
Sbjct: 212 NIQKESTLHLV 222


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 574 MRGSSSTGVFLEAIDVFADVVGTWMLLKSR 485
           M GS  TG++L   D+   V+G W +L  R
Sbjct: 314 MFGSFRTGLYLPTSDIDLVVIGQWTMLPLR 343


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 631 LFCLSNAS*SGLARNISLIMRGSSSTGVFLEAIDV 527
           L CL       L  N+S + RG   TG  L+ I++
Sbjct: 619 LLCLEAKDKEFLLANLSKVARGKDCTGEQLDRIEL 653


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 472 LGKAWLESLTLRFCAEFTMCRRIITSPSWTP 380
           L ++W+ SL +R       CR   T+PSW P
Sbjct: 108 LEQSWIYSLCMR-------CRVEYTTPSWEP 131


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 6   FFFVSKEREGTSQSFCL 56
           FF    E   T+QSFCL
Sbjct: 311 FFLAGFETSSTTQSFCL 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,776
Number of Sequences: 2352
Number of extensions: 13690
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)