Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P01
(529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0) 184 4e-47
SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 8e-29
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 66 1e-11
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 5.5
SB_5829| Best HMM Match : S4 (HMM E-Value=4.2) 28 5.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 27 7.2
SB_28542| Best HMM Match : E-MAP-115 (HMM E-Value=0.097) 27 9.6
SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1) 27 9.6
SB_50564| Best HMM Match : Allexi_40kDa (HMM E-Value=4.3) 27 9.6
>SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0)
Length = 265
Score = 184 bits (448), Expect = 4e-47
Identities = 82/124 (66%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Frame = +2
Query: 158 PLPXFKATAV-VNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 334
P P F TAV +GEF D+ LSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++ DEF+ I
Sbjct: 56 PAPAFSGTAVNKHGEFIDLKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRVDEFKAIN 115
Query: 335 CEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 514
CEV+ S DS ++HLAW N PRK+GG+G +NIP++SD + +IS+DYGVL E+ G+ RGL
Sbjct: 116 CEVIACSVDSEYSHLAWTNVPRKKGGIGNINIPILSDLTKQISKDYGVLLEDQGVALRGL 175
Query: 515 FIID 526
FIID
Sbjct: 176 FIID 179
>SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 123 bits (297), Expect = 8e-29
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = +2
Query: 158 PLPXFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 337
P P ++ TAVVNGEFK++ LSD++GKY+V FFYPLDFTFVCPTEIIAFS++ +EFR I
Sbjct: 59 PAPFWEGTAVVNGEFKELKLSDFEGKYLVFFFYPLDFTFVCPTEIIAFSDRIEEFRAINT 118
Query: 338 EVLGASTDSHFTHLAW 385
EV+G S DS FTHLAW
Sbjct: 119 EVVGCSVDSVFTHLAW 134
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +2
Query: 389 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIID 526
N PRK+GG+G +NIP++SD + +IS+DYGVL E+ G+ RGLFIID
Sbjct: 3 NVPRKKGGIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIID 48
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 322 ELVRLLRERDNLRRAHEREVQRIE 251
E++RL RERD RR E E +RI+
Sbjct: 1545 EVIRLQRERDEERRRREDEEKRIQ 1568
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = -1
Query: 325 AELVRLLRERDNLRRAHEREVQRIEEQHNIFPLVVRQRN 209
A+L R+ +ER+ L++ +E + EE+ I+ + ++N
Sbjct: 1194 AQLARVKKERNKLKQKYEELTEEDEEEDAIYEETIEKQN 1232
>SB_5829| Best HMM Match : S4 (HMM E-Value=4.2)
Length = 893
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 517 EESSEGDARLLVQHSVVARDAVRLVAYQRNVHGTESAL 404
+ ++EG+A+ H+V R+ + + Y R + GT+S L
Sbjct: 354 DTTAEGEAQRYFDHAVTLRNTILFLRYNRTL-GTDSTL 390
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 328 LAELVRLLRERDNLRRAHEREVQRIEEQHN 239
LAEL RL + + + HERE + ++ HN
Sbjct: 1380 LAELSRLREDFNKVNAEHEREKKELKSLHN 1409
>SB_28542| Best HMM Match : E-MAP-115 (HMM E-Value=0.097)
Length = 163
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 349 AEHLAADLAELVR-LLRERDNLRRAHEREVQRI 254
A++L + ELVR L+E+D + RAH E+ +
Sbjct: 20 ADYLIDEKTELVRGFLQEKDIIERAHTEELDEL 52
>SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1)
Length = 155
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 304 RERDNLRRAHEREVQRIEEQH 242
+E D L + H+R+++ I EQH
Sbjct: 100 KELDGLNKEHQRQIETIVEQH 120
>SB_50564| Best HMM Match : Allexi_40kDa (HMM E-Value=4.3)
Length = 290
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 340 LAADLAELVRLLRERDNLRRAHEREVQRIEEQHNIFPLVVRQRNV 206
LA LA + L ER+N +R REV + ++H F + R V
Sbjct: 48 LANQLANIGDELTERNNYKRRLAREVGLMAKRHEFFNVPSRPAGV 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,642
Number of Sequences: 59808
Number of extensions: 262309
Number of successful extensions: 851
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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