Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_P01
(529 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 161 3e-40
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 159 1e-39
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 70 8e-13
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 61 4e-10
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.051
At1g80910.1 68414.m09493 expressed protein 34 0.068
At1g16020.2 68414.m01922 expressed protein 32 0.27
At1g16020.1 68414.m01921 expressed protein 32 0.27
At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 31 0.48
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 30 1.1
At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 30 1.1
At5g48690.1 68418.m06025 hypothetical protein 28 4.5
At5g25070.1 68418.m02971 expressed protein 28 4.5
At4g16146.1 68417.m02449 expressed protein 28 4.5
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 28 4.5
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 28 4.5
At5g46410.1 68418.m05712 NLI interacting factor (NIF) family pro... 27 5.9
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 5.9
At4g18570.1 68417.m02749 proline-rich family protein common fami... 27 5.9
At4g18140.1 68417.m02696 NLI interacting factor (NIF) family pro... 27 5.9
At4g01680.1 68417.m00218 myb family transcription factor (MYB55) 27 5.9
At3g58950.1 68416.m06569 F-box family protein contains F-box dom... 27 7.8
At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 27 7.8
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 161 bits (391), Expect = 3e-40
Identities = 77/125 (61%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 155 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 331
N P F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ EF K+
Sbjct: 77 NKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKL 136
Query: 332 GCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRG 511
EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI RG
Sbjct: 137 NTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRG 196
Query: 512 LFIID 526
LFIID
Sbjct: 197 LFIID 201
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 159 bits (386), Expect = 1e-39
Identities = 75/125 (60%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 155 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 331
N P F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++ +EF K+
Sbjct: 84 NKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKL 143
Query: 332 GCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRG 511
EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI RG
Sbjct: 144 NTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRG 203
Query: 512 LFIID 526
LFIID
Sbjct: 204 LFIID 208
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 70.1 bits (164), Expect = 8e-13
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 382
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 383 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIID 526
+ + + + L+SD+ +++ +D+GV + G +P R +++D
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLD 187
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 61.3 bits (142), Expect = 4e-10
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 215 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 391
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 392 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFII 523
+N P+I+D + I ++D P R L I+
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIV 127
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.051
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 188 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 358
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 359 DSHFTHLAW 385
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.068
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +2
Query: 206 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 364
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 365 H 367
H
Sbjct: 79 H 79
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 242 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 367
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 242 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 367
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g57560.1 68414.m06531 myb family transcription factor (MYB50)
similar to DNA-binding protein GI:19058 from [Hordeum
vulgare]
Length = 314
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 506 GRGCPSPRPALRSRERCGATCRL 438
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 506 GRGCPSPRPALRSRERCGATCRL 438
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At1g09540.1 68414.m01070 myb family transcription factor (MYB61)
contains PFAM profile: myb DNA-binding domain PF00249
Length = 366
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 506 GRGCPSPRPALRSRERCGATCRL 438
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At5g48690.1 68418.m06025 hypothetical protein
Length = 301
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 337 AADLAELVRLLRERDNLRRAHEREVQRI 254
A +L+E R LRE +R ERE +RI
Sbjct: 65 AKELSEQARKLREEQETKREREREKERI 92
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -1
Query: 346 EHLAADLAELVRLLRERDNLRRAHEREVQRIEEQHN 239
EHLA +L EL+ L++ ++ ++ +++ +EE+ N
Sbjct: 387 EHLANELEELLALVKAKEKEIDENDSQIEAVEERIN 422
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 401 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 526
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 41 SRSDCHFYFKSESFSGAFGFRLLFKSL 121
S ++ H Y E++SGA GF +L +++
Sbjct: 394 STTELHKYLADENYSGAIGFYILLRAV 420
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 381 ARCVKCESVEAPSTSQPILRNSSAFSENAIISVGHTNVKSKG 256
++C K + + A S P +N+SAF E AI + N+ +G
Sbjct: 777 SKCFKEDELRAWSEPLPRNKNASAFDELAIFTTPERNLMLRG 818
>At5g46410.1 68418.m05712 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 453
Score = 27.5 bits (58), Expect = 5.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 9 INSMVPVESWFQDPT 53
IN+ +P++SW+ DPT
Sbjct: 407 INNGIPIKSWYDDPT 421
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 459 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 358
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 340 LAADLAELVRLLRERDNLRRAHEREVQRIEEQHNIFPLV---VRQRN--VLELSVDDGRG 176
+ ++L V LRER+ L + EV+ + E ++ PL+ + +N + EL + R
Sbjct: 86 VVSELRRQVEELREREALLKTENLEVKLLRESVSVIPLLESQIADKNGEIDELRKETARL 145
Query: 175 LEXGERV 155
E ER+
Sbjct: 146 AEDNERL 152
>At4g18140.1 68417.m02696 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 312
Score = 27.5 bits (58), Expect = 5.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 9 INSMVPVESWFQDPT 53
IN+ +P++SW+ DPT
Sbjct: 261 INNGIPIKSWYDDPT 275
>At4g01680.1 68417.m00218 myb family transcription factor (MYB55)
Length = 336
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 506 GRGCPSPRPALRSRERCGATCRL 438
G GC S P +RCG +CRL
Sbjct: 33 GHGCWSSVPKQAGLQRCGKSCRL 55
>At3g58950.1 68416.m06569 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -2
Query: 423 MGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSS 313
+GP P L+ ++I + ++C+++E + P+L S
Sbjct: 99 LGPVLPMLKTLIIDSAWIRCDTIETFLPTFPVLEELS 135
>At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor protein
kinase-like protein GI:10177178 from [Arabidopsis
thaliana]
Length = 1045
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 423 MGPSP---PCLRGVLIQARCVKCESVEAPSTSQPILRNSSA 310
+ PSP P ++ V+ VKC E TSQP+++ SS+
Sbjct: 1005 VNPSPVERPTMKEVVTLLMEVKCSPEEWGKTSQPLIKPSSS 1045
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,097,150
Number of Sequences: 28952
Number of extensions: 185973
Number of successful extensions: 646
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -