Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O23
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07) 136 1e-32
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 42 6e-04
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 31 1.1
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 29 2.5
SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055) 29 3.3
SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9) 29 4.4
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017) 28 5.8
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 28 7.6
SB_44157| Best HMM Match : IRF (HMM E-Value=0) 28 7.6
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 28 7.6
SB_10253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)
Length = 203
Score = 136 bits (330), Expect = 1e-32
Identities = 77/166 (46%), Positives = 104/166 (62%)
Frame = +3
Query: 24 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 203
MAAG LYTYP++FRA K LIAA+YSGT ++V P F FG+ N + +FLKKFP GKVPAFE+
Sbjct: 1 MAAGKLYTYPDSFRAQKILIAAEYSGTKIEV-PAFTFGKDNHTAEFLKKFPLGKVPAFET 59
Query: 204 ADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQ 383
AN R L T + +++D ELLPA+ WVFP G+MQ
Sbjct: 60 K---------------TANACTRAMPLLTT-----YVNFADQELLPAAATWVFPTYGMMQ 99
Query: 384 FNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 521
++KQ+ ++A D+ + +L+ LL +TFLV ER+TLAD+ V L
Sbjct: 100 YHKQSTDKAMEDVKKYMTMLNDVLLMKTFLVGERVTLADIAVCCVL 145
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Frame = +3
Query: 174 PAGKVPAFESADGKVLLTESNAIAYYVA--NESLRGGDLATQARVWQWASWSDSELLPAS 347
P +P E+ +G SN I Y+A ++ L G DL + +V QW + + A
Sbjct: 45 PFNTLPLLETKEGTFF--SSNTIIRYLAASSDKLYGSDLFQRGQVDQWLDITTCDFEAAV 102
Query: 348 CAWVFPYLGIMQFNKQNVERAK--SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 521
A G ++VE AK +D+ L ++ HL R FLV + +T+AD V +T
Sbjct: 103 AAVAIAKEG------RDVEGAKIVADINKFLGFVEKHLAGRKFLVGDSVTIADFSV-ATS 155
Query: 522 LHAFQHVLDPSVRSSLINVQRWF 590
+ L R N+ W+
Sbjct: 156 IAVILTSLGDEDRKPYQNIVSWY 178
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +3
Query: 57 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 236
N +K + Q + K+ P V GE N + +KK +P GK + + +
Sbjct: 105 NIGKFKMVWIDQIDESTKKLKPKMVAGEDNGFVNAIKKVSLEDIPEGNGPSGKAIREKRS 164
Query: 237 AIAYYVANESL 269
I + N+SL
Sbjct: 165 IIVNDIENDSL 175
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 357 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLAD 500
++P + Q NV+R +DL + K+ L R F V E T AD
Sbjct: 73 IYPNIMDEQIRTANVQRGSADLQTSAKITLKKFLPRCFSVIESTTSAD 120
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 140 LAKYEIRCYFHISPGILCGDQRFISAEVFRISVKYPGRHGWSFRKE 3
L K +R +I L + FI+ V +S+ G+H WSF KE
Sbjct: 200 LRKDSLRTVSNILVAALALSELFITVVVIPLSIIAYGKHLWSFHKE 245
>SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 279 DLATQARVWQWASWSDSELLPASCA 353
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055)
Length = 141
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 279 DLATQARVWQWASWSDSELLPASCA 353
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9)
Length = 364
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 186 LFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYK 67
+FR + + + S ++ N V +SHQSR IV T+ K
Sbjct: 102 VFRSKQQAPNKAVGRSDEVTNEVAVSHQSRRIVESETVRK 141
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 290 PSPCLAVGIMV*Q*TTACFLCLGLPLPWYHAIQQ 391
PSPC A+ + +T +C LP PWY AI Q
Sbjct: 1054 PSPCYAM-----RQSTKPVVCGNLPSPWYAAIYQ 1082
>SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017)
Length = 1675
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 461 THLPCYRENHTCRCHCLQYTAACFPARARPERPFVAD---KRSALVP 592
T P +R +HT L+ +PA+ RP+ P A K+ A VP
Sbjct: 1581 TQCPIFRPSHTIHHPPLRSRNVRYPAQVRPQYPLQASLNVKKGARVP 1627
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 375 IMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 509
+M + K +VE K DL L+ + LLTR FL+ + + D+I+
Sbjct: 194 VMSWIKHDVESRKKDLANLLEHIRFPLLTRKFLI-DTVAKEDLIM 237
>SB_44157| Best HMM Match : IRF (HMM E-Value=0)
Length = 181
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 101 PGILCGDQRFISAEVFRISVKYPGRHGWSFRKE 3
PG+ ++R +VF++S K+ RHGW K+
Sbjct: 22 PGVTWVERR---NKVFKVSWKHASRHGWELDKD 51
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 452 SSHTHLPC--YRENHTCRCHCLQYT 520
S +T PC Y+ TC C C+ YT
Sbjct: 873 SHYTPFPCPHYQGGPTCECQCMGYT 897
>SB_10253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 135 QIRNSVLLSHQSRNI-VRRSTL-YKRGSFPDKCKVPRPPWLEFSER 4
Q+R+ +L+ + N RR TL K +F + CK P P + SER
Sbjct: 37 QLRSKLLVLWRDENRRTRRKTLGAKHKAFTEGCKEPEGPSTDISER 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,005,157
Number of Sequences: 59808
Number of extensions: 535079
Number of successful extensions: 1433
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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