Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O16
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81048-2|CAB02840.1|  553|Caenorhabditis elegans Hypothetical pr...    60   7e-10
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    33   0.13 
AF101309-5|ABD94097.1|  543|Caenorhabditis elegans Hypothetical ...    29   1.6  
AF101309-4|AAV58863.1|  669|Caenorhabditis elegans Hypothetical ...    29   1.6  
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ...    29   1.6  
AF036700-4|AAV34787.1|  437|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF036700-3|AAB88366.2|  479|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z82051-2|CAB04816.1|  237|Caenorhabditis elegans Hypothetical pr...    27   6.3  

>Z81048-2|CAB02840.1|  553|Caenorhabditis elegans Hypothetical
           protein C41G7.3 protein.
          Length = 553

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
 Frame = +2

Query: 203 KDNSEKSWYDELKKPSWTPPK-WVFGPAWTVLYSSMGYASYLIWEECDGFT-EDAVLPLT 376
           KD     W+  LKKP+W P    V+     +  S +GYASYL+++   GF   D  L L 
Sbjct: 414 KDQQVADWWAALKKPNWAPKDVRVYSAVDLLTLSPLGYASYLVYKNGGGFDYNDTKLALG 473

Query: 377 LYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGL 532
           LYG  + L  +  PI    K+    +   +V+S  A A + +F  ++K AGL
Sbjct: 474 LYGASVTLAVATIPI-VKKKELGCLWKNTTVVSLTAAAASFAFYKIDKKAGL 524


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
            C47E8.8 protein.
          Length = 1675

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = -2

Query: 510  LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 331
            LP D V   +  D  E++   S KS  P++IG  D  SSS    +VR R      PS + 
Sbjct: 878  LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936

Query: 330  Q 328
            Q
Sbjct: 937  Q 937


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
            protein C47E8.8 protein.
          Length = 1675

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = -2

Query: 510  LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 331
            LP D V   +  D  E++   S KS  P++IG  D  SSS    +VR R      PS + 
Sbjct: 878  LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936

Query: 330  Q 328
            Q
Sbjct: 937  Q 937


>AF101309-5|ABD94097.1|  543|Caenorhabditis elegans Hypothetical
           protein H24G06.1e protein.
          Length = 543

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -2

Query: 525 AVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVK 346
           A  L +P  S   +  PD    + +   +S +P K  +   ++S  TP +    T SS+ 
Sbjct: 57  ATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNKFALSQMINSRDTPSSPSSTTGSSIV 116

Query: 345 PSHSSQMR 322
             +  Q R
Sbjct: 117 GRNLQQRR 124


>AF101309-4|AAV58863.1|  669|Caenorhabditis elegans Hypothetical
           protein H24G06.1d protein.
          Length = 669

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -2

Query: 525 AVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVK 346
           A  L +P  S   +  PD    + +   +S +P K  +   ++S  TP +    T SS+ 
Sbjct: 183 ATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNKFALSQMINSRDTPSSPSSTTGSSIV 242

Query: 345 PSHSSQMR 322
             +  Q R
Sbjct: 243 GRNLQQRR 250


>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
            protein H24G06.1b protein.
          Length = 1601

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -2

Query: 525  AVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVK 346
            A  L +P  S   +  PD    + +   +S +P K  +   ++S  TP +    T SS+ 
Sbjct: 1115 ATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNKFALSQMINSRDTPSSPSSTTGSSIV 1174

Query: 345  PSHSSQMR 322
              +  Q R
Sbjct: 1175 GRNLQQRR 1182


>AF036700-4|AAV34787.1|  437|Caenorhabditis elegans Hypothetical
           protein M04G7.3b protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 459 SMNASLKSFNPKKIGVQDQLSSSCTPYN 376
           S+N+S+K   P KIG+   LS+  TP N
Sbjct: 401 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 428


>AF036700-3|AAB88366.2|  479|Caenorhabditis elegans Hypothetical
           protein M04G7.3a protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 459 SMNASLKSFNPKKIGVQDQLSSSCTPYN 376
           S+N+S+K   P KIG+   LS+  TP N
Sbjct: 443 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 470


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 403 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 516
           L+L +++  +E L    H D   V  S GNDT+   CQ
Sbjct: 11  LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 403 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 516
           L+L +++  +E L    H D   V  S GNDT+   CQ
Sbjct: 11  LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48


>Z82051-2|CAB04816.1|  237|Caenorhabditis elegans Hypothetical
           protein T23D5.3 protein.
          Length = 237

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +3

Query: 147 SSQMSVDGPMDCSLRVKSVKTTVKSPGMMS*RSQAGLPQSGYLVQLGLFSTAA 305
           ++Q +  GP     RV+ V TT  +PG  + RS   +  +G     G  +T +
Sbjct: 80  TTQCTTCGPKTTPQRVEPVMTTTVAPGATTVRSPGSVTTAGSATTAGSATTGS 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,216,775
Number of Sequences: 27780
Number of extensions: 297742
Number of successful extensions: 831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)