Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O14
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   2.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   3.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   10.0 
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   10.0 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   10.0 

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 279 LFVACCILRCTRGWECGNAGNRSS*ANDTLFSYPTLF 169
           +++   ILR +    C N    SS       SY TLF
Sbjct: 99  IYILMAILRMSADGGCRNFSTCSSHPTAAFISYGTLF 135


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 279 LFVACCILRCTRGWECGNAGNRSS*ANDTLFSYPTLF 169
           +++   ILR +    C N    SS       SY TLF
Sbjct: 98  IYILMAILRMSADGGCRNFSTCSSHPTAAFISYGTLF 134


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 130 YHISNHHGLLMHHFCLLRQS 71
           YH+ NHH    +H  +L  S
Sbjct: 274 YHLDNHHVHHANHHAILGHS 293


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 405 SLVMEWQVLKDSPSPKVLALSSFRSSYGTWKT 310
           S+ + W    D  SP    +  ++ S G+W+T
Sbjct: 891 SVQLSWAAPYDGNSPIKRYVIEYKISKGSWET 922


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 74  LPEETKMMHQQSMMVGD 124
           +P++T+ + QQS   GD
Sbjct: 34  VPQQTQSVQQQSQQAGD 50


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 MVGDVIPVHPDVPMHV 160
           M+G  + VH DV  HV
Sbjct: 469 MIGQYVTVHGDVISHV 484


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 MVGDVIPVHPDVPMHV 160
           M+G  + VH DV  HV
Sbjct: 469 MIGQYVTVHGDVISHV 484


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 161 EEMNNVGYENNVSFAYDDL 217
           EE+N    +NN    YDD+
Sbjct: 332 EEINTFCPKNNKELKYDDI 350


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 424 FDVRSCILSYGMASS*GFSL 365
           FD ++C+L +G  +  GF +
Sbjct: 162 FDEQTCVLKFGSWTYDGFKV 181


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 164 LQHAWVHQDERVS 126
           L+H W+ Q ERV+
Sbjct: 165 LKHPWICQRERVA 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,215
Number of Sequences: 438
Number of extensions: 3441
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)