Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O12
(383 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UQE7 Cluster: Structural maintenance of chromosomes p... 69 4e-11
UniRef50_A7SQ80 Cluster: Predicted protein; n=1; Nematostella ve... 64 9e-10
UniRef50_Q9U2C1 Cluster: Putative uncharacterized protein smc-3;... 59 2e-08
UniRef50_Q8GU54 Cluster: SMC3 protein; n=10; Oryza sativa|Rep: S... 58 6e-08
UniRef50_A7QJS0 Cluster: Chromosome undetermined scaffold_107, w... 57 1e-07
UniRef50_Q8H2D2 Cluster: SMC3 protein; n=8; Arabidopsis thaliana... 56 2e-07
UniRef50_Q5TS71 Cluster: ENSANGP00000029024; n=1; Anopheles gamb... 56 3e-07
UniRef50_A2DTP6 Cluster: SMC flexible hinge domain protein, puta... 52 5e-06
UniRef50_A5DN12 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_Q6CI88 Cluster: Yarrowia lipolytica chromosome A of str... 50 2e-05
UniRef50_Q5AEZ0 Cluster: Potential nuclear cohesin complex SMC A... 49 3e-05
UniRef50_Q00737 Cluster: Chromosome segregation protein sudA; n=... 49 3e-05
UniRef50_P47037 Cluster: Structural maintenance of chromosomes p... 48 5e-05
UniRef50_O42649 Cluster: Structural maintenance of chromosomes p... 48 5e-05
UniRef50_Q2H9D9 Cluster: Putative uncharacterized protein; n=1; ... 48 8e-05
UniRef50_A6R2K5 Cluster: Chromosome segregation protein sudA; n=... 48 8e-05
UniRef50_Q4QIG8 Cluster: Structural maintenance of chromosome 3 ... 47 1e-04
UniRef50_Q5KIH7 Cluster: Chromosome associated protein, putative... 46 2e-04
UniRef50_A4QTR6 Cluster: Putative uncharacterized protein; n=4; ... 46 2e-04
UniRef50_Q6CYH7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 45 4e-04
UniRef50_UPI0000499CE1 Cluster: SMC3 protein; n=1; Entamoeba his... 45 6e-04
UniRef50_Q4DL10 Cluster: Structural maintenance of chromosome 3 ... 44 0.001
UniRef50_Q0UYB6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_A2EIA2 Cluster: SMC family, C-terminal domain containin... 41 0.009
UniRef50_A3M0D4 Cluster: Structural maintenance of chromosome pr... 38 0.049
UniRef50_Q5CYE0 Cluster: SMC3'SMC type chromosomal ABC ATpase'; ... 38 0.065
UniRef50_Q552D9 Cluster: Structural maintenance of chromosome pr... 38 0.065
UniRef50_A0BGZ5 Cluster: Chromosome undetermined scaffold_107, w... 38 0.086
UniRef50_Q9N6I4 Cluster: SMC1 protein; n=9; Endopterygota|Rep: S... 37 0.11
UniRef50_Q4WX53 Cluster: Cohesin complex subunit (Psm1), putativ... 37 0.11
UniRef50_A5VKP1 Cluster: Chromosome segregation protein SMC; n=2... 37 0.15
UniRef50_A6R3T3 Cluster: Putative uncharacterized protein; n=3; ... 36 0.20
UniRef50_O94383 Cluster: Structural maintenance of chromosomes p... 36 0.20
UniRef50_Q14683 Cluster: Structural maintenance of chromosomes p... 36 0.20
UniRef50_Q5A021 Cluster: Potential nuclear cohesin complex SMC A... 36 0.26
UniRef50_Q7SEK5 Cluster: Putative uncharacterized protein NCU028... 36 0.35
UniRef50_Q2HE99 Cluster: Putative uncharacterized protein; n=1; ... 36 0.35
UniRef50_P32908 Cluster: Structural maintenance of chromosomes p... 36 0.35
UniRef50_A4RK72 Cluster: Putative uncharacterized protein; n=2; ... 35 0.46
UniRef50_O01789 Cluster: High incidence of males (Increased x ch... 35 0.61
UniRef50_A5K5W0 Cluster: Chromosome associated protein, putative... 35 0.61
UniRef50_A0DPG5 Cluster: Chromosome undetermined scaffold_59, wh... 35 0.61
UniRef50_Q0U9D1 Cluster: Putative uncharacterized protein; n=1; ... 35 0.61
UniRef50_A4HN20 Cluster: Structural maintenance of chromosome (S... 34 1.1
UniRef50_Q8NDV3 Cluster: Structural maintenance of chromosomes p... 34 1.1
UniRef50_Q6C5S3 Cluster: Yarrowia lipolytica chromosome E of str... 33 1.4
UniRef50_Q5KM80 Cluster: Cohesin complex subunit psm1, putative;... 33 1.4
UniRef50_Q0LKW2 Cluster: MukB N-terminal domain/M protein repeat... 33 1.9
UniRef50_Q60TG3 Cluster: Putative uncharacterized protein CBG204... 33 1.9
UniRef50_A2DH38 Cluster: SMC flexible hinge domain protein, puta... 33 1.9
UniRef50_Q6FUN1 Cluster: Candida glabrata strain CBS138 chromoso... 33 1.9
UniRef50_Q2U6F8 Cluster: Predicted protein; n=8; Eurotiomycetida... 33 1.9
UniRef50_Q5E723 Cluster: Oligopeptide transport ATP-binding prot... 33 2.5
UniRef50_A1TJY9 Cluster: Putative uncharacterized protein; n=5; ... 33 2.5
UniRef50_A4RUQ7 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 2.5
UniRef50_Q7QYX0 Cluster: GLP_164_29061_32786; n=1; Giardia lambl... 33 2.5
UniRef50_Q8R9W7 Cluster: Chromosome segregation ATPases; n=3; Th... 32 3.3
UniRef50_Q6KHN4 Cluster: Segregation of chromosomes protein; n=1... 32 3.3
UniRef50_Q4N928 Cluster: SMC protein, putative; n=2; Theileria|R... 32 3.3
UniRef50_A6SJQ7 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_Q3ABE6 Cluster: MukB N-terminal domain/M protein repeat... 32 4.3
UniRef50_Q0LFN7 Cluster: Chromosome segregation protein SMC; n=1... 32 4.3
UniRef50_A0UWP3 Cluster: SMC protein-like; n=1; Clostridium cell... 32 4.3
UniRef50_Q9M1T3 Cluster: Structural maintenance of chromosomes (... 32 4.3
UniRef50_A2FBW6 Cluster: SMC family, C-terminal domain containin... 32 4.3
UniRef50_Q8SQJ6 Cluster: CHROMOSOME SEGREGATION PROTEIN OF THE S... 32 4.3
UniRef50_A6LLE9 Cluster: Chromosome segregation protein SMC; n=1... 31 5.7
UniRef50_Q5CYL8 Cluster: SMC4'SMC4, chromosomal ATpase with gian... 31 5.7
UniRef50_Q4Q6S2 Cluster: V-type ATPase, C subunit, putative; n=5... 31 5.7
UniRef50_Q4N043 Cluster: Putative uncharacterized protein; n=1; ... 31 5.7
UniRef50_Q8SS38 Cluster: CHROMOSOME SEGREGATION PROTEIN; n=1; En... 31 5.7
UniRef50_Q8SRK4 Cluster: CUT3-LIKE CHROMOSOME SEGREGATION PROTEI... 31 5.7
UniRef50_Q1DYS9 Cluster: Putative uncharacterized protein; n=1; ... 31 5.7
UniRef50_P41004 Cluster: Structural maintenance of chromosomes p... 31 5.7
UniRef50_P75361 Cluster: Protein P115 homolog; n=6; Mycoplasma|R... 31 5.7
UniRef50_Q88WJ9 Cluster: Cell division protein Smc; n=1; Lactoba... 31 7.5
UniRef50_Q81ZN4 Cluster: SMC protein; n=2; Enterococcus|Rep: SMC... 31 7.5
UniRef50_Q7UYP8 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q5SJV3 Cluster: Chromosome segregation SMC protein; n=2... 31 7.5
UniRef50_Q4A588 Cluster: Putative ABC transporter ATP-binding pr... 31 7.5
UniRef50_Q1PYY7 Cluster: Similar to nickel insertase (CooC) of C... 31 7.5
UniRef50_A6TLK7 Cluster: SMC domain protein; n=1; Alkaliphilus m... 31 7.5
UniRef50_A6Q876 Cluster: DNA double-strand break repair protein;... 31 7.5
UniRef50_Q45N98 Cluster: Structural maintenance of chromosome 3;... 31 7.5
UniRef50_Q3SE63 Cluster: Structural maintenance of chromosomes 1... 31 7.5
UniRef50_Q5VZV1 Cluster: OTTHUMP00000018663; n=13; Amniota|Rep: ... 31 7.5
UniRef50_UPI00015C6170 Cluster: hypothetical protein CKO_03997; ... 31 9.9
UniRef50_Q765Q4 Cluster: Meiosis-specific cohesin subunit SMC1 b... 31 9.9
UniRef50_A0LBT8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_A7Q1S8 Cluster: Chromosome chr7 scaffold_44, whole geno... 31 9.9
UniRef50_A5H621 Cluster: SMC1; n=5; Magnoliophyta|Rep: SMC1 - So... 31 9.9
UniRef50_Q38DK9 Cluster: Structural maintenance of chromosome 1,... 31 9.9
UniRef50_A7AQK3 Cluster: Structural maintenance of chromosome 1-... 31 9.9
UniRef50_A2EKI4 Cluster: SMC flexible hinge domain protein, puta... 31 9.9
UniRef50_A2DSN1 Cluster: SMC family, C-terminal domain containin... 31 9.9
>UniRef50_Q9UQE7 Cluster: Structural maintenance of chromosomes
protein 3; n=68; Fungi/Metazoa group|Rep: Structural
maintenance of chromosomes protein 3 - Homo sapiens
(Human)
Length = 1217
Score = 68.5 bits (160), Expect = 4e-11
Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPF--NLYSAMNSPISD 270
++IKQVIIQG + F S+ +V+V + + F + ++ S
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPF-----SSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSH 55
Query: 271 LT--QRLALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
L QRLALLHEGTGPRVISAFVEII DNSDNR+PI+ +
Sbjct: 56 LRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKE 94
>UniRef50_A7SQ80 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1073
Score = 64.1 bits (149), Expect = 9e-10
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
+R ALLHEGTGPRV+SAFVE+I DNSDNR+PIE D
Sbjct: 56 ERQALLHEGTGPRVVSAFVELIFDNSDNRLPIEKD 90
Score = 51.6 bits (118), Expect = 5e-06
Identities = 27/42 (64%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLS-DEFSHLRPDSAAGPTARGNRP 311
VGRNGSGKSNFF AIQFVLS DEFS+LR + G P
Sbjct: 26 VGRNGSGKSNFFFAIQFVLSADEFSNLRQEERQALLHEGTGP 67
Score = 37.1 bits (82), Expect = 0.11
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 122 KAFKSYREQIVVEPFDKRHNVVSG 193
+ F+SYR+Q ++EPF +HNV+ G
Sbjct: 4 QGFRSYRDQTIIEPFSSKHNVIVG 27
>UniRef50_Q9U2C1 Cluster: Putative uncharacterized protein smc-3;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein smc-3 - Caenorhabditis elegans
Length = 1205
Score = 59.3 bits (137), Expect = 2e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAG 287
VGRNGSGKSNFFHAIQFVLSDE++HL+ + G
Sbjct: 31 VGRNGSGKSNFFHAIQFVLSDEYAHLKEEQRLG 63
Score = 41.5 bits (93), Expect = 0.005
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNRI 366
QRL LLHE TGP+V A VEI DNS+ R+
Sbjct: 60 QRLGLLHESTGPKVAHARVEITFDNSEKRL 89
>UniRef50_Q8GU54 Cluster: SMC3 protein; n=10; Oryza sativa|Rep: SMC3
protein - Oryza sativa (Rice)
Length = 1205
Score = 58.0 bits (134), Expect = 6e-08
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDLT 276
++IKQV+I+G + F + +V+V A + + N + A+ +SD+
Sbjct: 1 MYIKQVVIEGFKSYREEISTEPF-----SPKVNVVVGANGSGKS--NFFHAIRFVLSDMF 53
Query: 277 QRL------ALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
Q L ALLHEG G V+SAFVEI+ DNSDNRIP++ +
Sbjct: 54 QNLRSEDRGALLHEGAGHSVVSAFVEIVFDNSDNRIPVDKE 94
>UniRef50_A7QJS0 Cluster: Chromosome undetermined scaffold_107,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_107, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1274
Score = 56.8 bits (131), Expect = 1e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
Frame = +1
Query: 235 NLYSAMNSPISDLTQRL------ALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
N + A+ +SDL Q L ALLHEG G +V+SAFVEI+ DNSDNRIP++ +
Sbjct: 14 NFFHAIRFVLSDLFQNLRSEDRHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKE 68
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 186 SVGRNGSGKSNFFHAIQFVLSDEFSHLRPD 275
SVG NGSGK+NFFHAI+FVLSD F +LR +
Sbjct: 4 SVGANGSGKTNFFHAIRFVLSDLFQNLRSE 33
>UniRef50_Q8H2D2 Cluster: SMC3 protein; n=8; Arabidopsis
thaliana|Rep: SMC3 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1205
Score = 56.0 bits (129), Expect = 2e-07
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDLT 276
+ IKQVII+G + F ++ + +V A + + N + A+ +SD+
Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEF-----SNKVNCVVGANGSGKS--NFFHAIRFVLSDIY 53
Query: 277 QRL------ALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
Q L ALLHEG G +V+SAFVEI+ DNSDNR P++ +
Sbjct: 54 QNLRSEDRHALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKE 94
>UniRef50_Q5TS71 Cluster: ENSANGP00000029024; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000029024 - Anopheles gambiae
str. PEST
Length = 1214
Score = 55.6 bits (128), Expect = 3e-07
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARG 302
VGRNGSGKSNFF AI+FVLSDE+++LRP G +G
Sbjct: 32 VGRNGSGKSNFFSAIEFVLSDEYNNLRPAQRVGLINKG 69
Score = 31.9 bits (69), Expect = 4.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 128 FKSYREQIVVEPFDKRHNVVSG 193
FKSY+ Q VVE D +HNVV G
Sbjct: 12 FKSYKLQTVVERLDPKHNVVVG 33
>UniRef50_A2DTP6 Cluster: SMC flexible hinge domain protein,
putative; n=1; Trichomonas vaginalis G3|Rep: SMC
flexible hinge domain protein, putative - Trichomonas
vaginalis G3
Length = 1155
Score = 51.6 bits (118), Expect = 5e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRP 272
VG NGSGKSNF++AI+FVL DEF HLRP
Sbjct: 34 VGLNGSGKSNFYNAIEFVLLDEFDHLRP 61
Score = 35.5 bits (78), Expect = 0.35
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 286 ALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
+LLHEG G +AFVEI+ N IPIE D
Sbjct: 66 SLLHEGQGVSSPTAFVEIVFSNESRVIPIEKD 97
>UniRef50_A5DN12 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1210
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGN 305
VGRNGSGKSNFF AI+FVLSD ++H+ + G GN
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTHMEREERQGLIHEGN 69
Score = 46.0 bits (104), Expect = 2e-04
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDL- 273
+HIK+++IQG + A S +V R S N ++A+ +SD
Sbjct: 1 MHIKRIVIQGFKTYKNATVIDLL------SPHHNVVVGR-NGSGKSNFFAAIRFVLSDAY 53
Query: 274 -----TQRLALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
+R L+HEG G V+SA+VEII DN+D R+PI D
Sbjct: 54 THMEREERQGLIHEGNGT-VMSAYVEIIFDNTDRRLPISKD 93
>UniRef50_Q6CI88 Cluster: Yarrowia lipolytica chromosome A of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome A of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1189
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGN 305
VGRNGSGKSNFF A++FVLSD ++HL + A G+
Sbjct: 31 VGRNGSGKSNFFAAVRFVLSDAYNHLNKEERAALIHEGS 69
Score = 41.1 bits (92), Expect = 0.007
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Frame = +1
Query: 277 QRLALLHEGTGPR--VISAFVEIISDNSDNRIP 369
+R AL+HEG+G +SAFVEII DNSD R+P
Sbjct: 60 ERAALIHEGSGMSGTTMSAFVEIIFDNSDRRLP 92
>UniRef50_Q5AEZ0 Cluster: Potential nuclear cohesin complex SMC
ATPase; n=6; Saccharomycetales|Rep: Potential nuclear
cohesin complex SMC ATPase - Candida albicans (Yeast)
Length = 1240
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGN 305
VGRNGSGKSNFF AI+FVLSD ++H+ + G G+
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTHMSREERQGLIHEGS 69
Score = 42.3 bits (95), Expect = 0.003
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDL- 273
+HIK++IIQG + + C+ +V R S N ++A+ +SD
Sbjct: 1 MHIKKIIIQGFKTYKNTTTIDLL--SPHCN----VVVGR-NGSGKSNFFAAIRFVLSDAY 53
Query: 274 -----TQRLALLHEGTGPRVISAFVEIISDNSDNRIPI 372
+R L+HEG+G V+SA+VEII DN+D R PI
Sbjct: 54 THMSREERQGLIHEGSGT-VMSAYVEIIFDNTDGRFPI 90
>UniRef50_Q00737 Cluster: Chromosome segregation protein sudA; n=3;
Trichocomaceae|Rep: Chromosome segregation protein sudA
- Emericella nidulans (Aspergillus nidulans)
Length = 1211
Score = 49.2 bits (112), Expect = 3e-05
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDL- 273
+++KQ+IIQG + F + +V+V + + N ++A+ +SD
Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPF-----SPKHNVIVGRNGSGKS--NFFAAIRFVLSDAY 53
Query: 274 -----TQRLALLHEGTGPRVISAFVEIISDNSDNRIP 369
+R ALLHEG+G V+SA+VEII DNSD R P
Sbjct: 54 THLGREERQALLHEGSGSAVMSAYVEIIFDNSDERFP 90
Score = 48.4 bits (110), Expect = 5e-05
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD ++HL
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTHL 56
>UniRef50_P47037 Cluster: Structural maintenance of chromosomes
protein 3; n=3; Saccharomycetales|Rep: Structural
maintenance of chromosomes protein 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1230
Score = 48.4 bits (110), Expect = 5e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGN 305
+G NGSGKSNFF AI+FVLSD++S+L+ + G +G+
Sbjct: 31 IGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGS 69
>UniRef50_O42649 Cluster: Structural maintenance of chromosomes
protein 3; n=1; Schizosaccharomyces pombe|Rep:
Structural maintenance of chromosomes protein 3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1194
Score = 48.4 bits (110), Expect = 5e-05
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD ++HL
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTHL 56
Score = 41.5 bits (93), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNRIP 369
+R ALLHEG G V+SA+VE+ N+DNR P
Sbjct: 60 ERQALLHEGPGATVMSAYVEVTFANADNRFP 90
Score = 31.5 bits (68), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 122 KAFKSYREQIVVEPFDKRHNVVSG 193
+ FKSY++ V+EP HNV+ G
Sbjct: 9 QGFKSYKDYTVIEPLSPHHNVIVG 32
>UniRef50_Q2H9D9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1169
Score = 47.6 bits (108), Expect = 8e-05
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDL- 273
+HIKQ+IIQG + F S ++ R S N ++A+ +SD
Sbjct: 1 MHIKQIIIQGFKSYKDQTVIEPF------SPGTNVIVGR-NGSGKSNFFAAIRFVLSDAY 53
Query: 274 -----TQRLALLHEGTGPRVISAFVEIISDNSDNR 363
+R ALLHEG+G V+SA+VEII DN D R
Sbjct: 54 TNMSREERQALLHEGSGSAVMSAYVEIIFDNQDKR 88
Score = 44.8 bits (101), Expect = 6e-04
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD ++++
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTNM 56
>UniRef50_A6R2K5 Cluster: Chromosome segregation protein sudA; n=8;
Pezizomycotina|Rep: Chromosome segregation protein sudA
- Ajellomyces capsulatus NAm1
Length = 1267
Score = 47.6 bits (108), Expect = 8e-05
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD ++H+
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTHM 56
Score = 37.5 bits (83), Expect = 0.086
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 292 LHEGTGPRVISAFVEIISDNSDNRIP 369
+ EG+G V+SA+VEII DNSD R P
Sbjct: 85 IQEGSGSAVMSAYVEIIFDNSDERFP 110
Score = 37.1 bits (82), Expect = 0.11
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 122 KAFKSYREQIVVEPFDKRHNVVSG 193
+ FKSY++Q V+EPF +HNV+ G
Sbjct: 9 QGFKSYKDQTVIEPFSPKHNVIVG 32
>UniRef50_Q4QIG8 Cluster: Structural maintenance of chromosome 3
protein, putative; n=3; Leishmania|Rep: Structural
maintenance of chromosome 3 protein, putative -
Leishmania major
Length = 1198
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
VG+NGSGKSNFF AIQFVL+++F++LR
Sbjct: 31 VGKNGSGKSNFFAAIQFVLNEKFANLR 57
Score = 36.3 bits (80), Expect = 0.20
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNRIPI 372
+R L H G+G +S FVEI+ DNSD R+ I
Sbjct: 60 ERKELFHVGSGRPALSVFVEIVFDNSDGRLVI 91
>UniRef50_Q5KIH7 Cluster: Chromosome associated protein, putative;
n=2; Basidiomycota|Rep: Chromosome associated protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1208
Score = 46.4 bits (105), Expect = 2e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD+++ L
Sbjct: 31 VGRNGSGKSNFFSAIRFVLSDQYTKL 56
Score = 39.1 bits (87), Expect = 0.028
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Frame = +1
Query: 235 NLYSAMNSPISDLTQRLA------LLHEGTGPRV-ISAFVEIISDNSDNRIP 369
N +SA+ +SD +L+ LLHEGT +SA+VEI+ DNSD R P
Sbjct: 40 NFFSAIRFVLSDQYTKLSREERQRLLHEGTSTSTTLSAYVEIVFDNSDGRFP 91
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 122 KAFKSYREQIVVEPFDKRHNVVSG 193
+ FKSYR+Q+ V+PF HNVV G
Sbjct: 9 QGFKSYRDQVAVDPFSPGHNVVVG 32
>UniRef50_A4QTR6 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1204
Score = 46.4 bits (105), Expect = 2e-04
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = +1
Query: 97 LHIKQVIIQGIQELPRANCCRAF**TT*CSQWDVMVQARVTFSTPFNLYSAMNSPISDL- 273
++IKQ+IIQG + F S ++ R S N ++A+ +SD
Sbjct: 1 MYIKQIIIQGFKSYKEQTVIEPF------SPGTNVIVGR-NGSGKSNFFAAIRFVLSDAY 53
Query: 274 -----TQRLALLHEGTGPRVISAFVEIISDNSDNR 363
+R ALLHEG+G V++A+VE+I DNSD+R
Sbjct: 54 TQMSREERQALLHEGSGSAVMTAYVEVIFDNSDDR 88
Score = 44.4 bits (100), Expect = 8e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VGRNGSGKSNFF AI+FVLSD ++ +
Sbjct: 31 VGRNGSGKSNFFAAIRFVLSDAYTQM 56
>UniRef50_Q6CYH7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome A of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 1280
Score = 45.2 bits (102), Expect = 4e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAG 287
VG NGSGKSNFF AI+FVLS+E S+L+ + G
Sbjct: 88 VGSNGSGKSNFFAAIRFVLSEENSNLKREDRKG 120
>UniRef50_UPI0000499CE1 Cluster: SMC3 protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: SMC3 protein - Entamoeba
histolytica HM-1:IMSS
Length = 1188
Score = 44.8 bits (101), Expect = 6e-04
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE-FSHLR 269
+GRNGSGKSNF+ AIQFVL DE F +LR
Sbjct: 32 IGRNGSGKSNFYDAIQFVLCDEKFGNLR 59
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 280 RLALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
R LL+EG G V+SAFVE++ DN D R IE D
Sbjct: 63 RQFLLYEGNGESVVSAFVEVVFDNRDRRFMIERD 96
Score = 31.5 bits (68), Expect = 5.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 122 KAFKSYREQIVVEPFDKRHNVVSG 193
K FKSY+EQ+ + FD +NVV G
Sbjct: 10 KGFKSYQEQLNFDEFDPHYNVVIG 33
>UniRef50_Q4DL10 Cluster: Structural maintenance of chromosome 3
protein, putative; n=6; Trypanosoma|Rep: Structural
maintenance of chromosome 3 protein, putative -
Trypanosoma cruzi
Length = 1200
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
VG+NGSGKSNFF A+QFVLS++++ L
Sbjct: 31 VGKNGSGKSNFFAAVQFVLSEKYTTL 56
Score = 36.3 bits (80), Expect = 0.20
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNRIPI 372
+R L H G+G +S FVEII DNSD R+ I
Sbjct: 60 ERKELFHAGSGRPALSIFVEIIFDNSDGRLII 91
>UniRef50_Q0UYB6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1217
Score = 42.3 bits (95), Expect = 0.003
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEF 257
VGRNGSGKSNFF A++FVL D++
Sbjct: 32 VGRNGSGKSNFFAAVRFVLGDDY 54
Score = 37.9 bits (84), Expect = 0.065
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 277 QRLALLHEGTGPRVISAFVEIISDNSDNR 363
QR LLHEG+G V+SA+VE+ DN+++R
Sbjct: 61 QRQNLLHEGSGSAVMSAYVEVCFDNTEDR 89
>UniRef50_A2EIA2 Cluster: SMC family, C-terminal domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: SMC family,
C-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 1095
Score = 40.7 bits (91), Expect = 0.009
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRP 272
+G NGSGKSN + AI+FVL DE++ L P
Sbjct: 31 IGFNGSGKSNLYKAIEFVLLDEYAKLTP 58
Score = 37.1 bits (82), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 274 TQRLALLHEGTGPRVISAFVEIISDNSDNRIPI 372
T+RLA+LHEG + A +E++ DN+ +IPI
Sbjct: 59 TERLAVLHEGAESKAKKATIEVVFDNTARKIPI 91
>UniRef50_A3M0D4 Cluster: Structural maintenance of chromosome
protein 1; n=3; Saccharomycetaceae|Rep: Structural
maintenance of chromosome protein 1 - Pichia stipitis
(Yeast)
Length = 1240
Score = 38.3 bits (85), Expect = 0.049
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGNR 308
+G NG+GKSN AI FVL SHLR + RG R
Sbjct: 32 IGPNGAGKSNLMDAISFVLGVRSSHLRSQNLKDLIYRGRR 71
>UniRef50_Q5CYE0 Cluster: SMC3'SMC type chromosomal ABC ATpase';
n=3; Eukaryota|Rep: SMC3'SMC type chromosomal ABC
ATpase' - Cryptosporidium parvum Iowa II
Length = 1304
Score = 37.9 bits (84), Expect = 0.065
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSH 263
VG NGSGKSN AIQF+LSD F +
Sbjct: 60 VGLNGSGKSNILAAIQFLLSDSFGN 84
Score = 37.5 bits (83), Expect = 0.086
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 235 NLYSAMNSPISD-----LTQRLALLHEGTGPRVISAFVEIISDNSDNRI 366
N+ +A+ +SD L +R ALLHEG GP+ A+VE+ DN R+
Sbjct: 69 NILAAIQFLLSDSFGNTLVERRALLHEGLGPQATEAYVELSLDNIGRRL 117
>UniRef50_Q552D9 Cluster: Structural maintenance of chromosome
protein; n=2; Dictyostelium discoideum|Rep: Structural
maintenance of chromosome protein - Dictyostelium
discoideum AX4
Length = 1437
Score = 37.9 bits (84), Expect = 0.065
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Frame = +1
Query: 235 NLYSAMNSPISDLT------QRLALLHEGTGPRVISAFVEIISDNSDNRIPIE 375
NL++A+ + DL RL LLH G + + +VEI+ DNSD+R PI+
Sbjct: 41 NLFAAIRFLLGDLNVGNNSEDRLKLLHSYGGNTMQTGYVEIVFDNSDHRFPID 93
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 192 GRNGSGKSNFFHAIQFVLSD 251
GRNG+GKSN F AI+F+L D
Sbjct: 33 GRNGAGKSNLFAAIRFLLGD 52
>UniRef50_A0BGZ5 Cluster: Chromosome undetermined scaffold_107,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 37.5 bits (83), Expect = 0.086
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEF 257
VG+NGSGKSNF +A+ F L+D+F
Sbjct: 29 VGKNGSGKSNFVNALLFALTDKF 51
>UniRef50_Q9N6I4 Cluster: SMC1 protein; n=9; Endopterygota|Rep: SMC1
protein - Drosophila melanogaster (Fruit fly)
Length = 1238
Score = 37.1 bits (82), Expect = 0.11
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSNF AI FV+ ++ S LR
Sbjct: 54 IGPNGSGKSNFMDAISFVMGEKTSSLR 80
>UniRef50_Q4WX53 Cluster: Cohesin complex subunit (Psm1), putative;
n=12; Pezizomycotina|Rep: Cohesin complex subunit
(Psm1), putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 1289
Score = 37.1 bits (82), Expect = 0.11
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARG 302
+G NGSGKSN AI FVL + SHLR + RG
Sbjct: 32 IGPNGSGKSNSMDAISFVLGIKSSHLRSTNLRDLVYRG 69
>UniRef50_A5VKP1 Cluster: Chromosome segregation protein SMC; n=2;
Lactobacillus reuteri|Rep: Chromosome segregation
protein SMC - Lactobacillus reuteri F275
Length = 1187
Score = 36.7 bits (81), Expect = 0.15
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFS-HLRPDSAAGPTARGN 305
VG NGSGKSN AIQ+V+ ++ + HLR D A G+
Sbjct: 30 VGPNGSGKSNIIEAIQWVMGEQSAHHLRGDRMADVIFNGS 69
>UniRef50_A6R3T3 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 1329
Score = 36.3 bits (80), Expect = 0.20
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL + SHLR
Sbjct: 101 IGPNGSGKSNSMDAISFVLGIKSSHLR 127
>UniRef50_O94383 Cluster: Structural maintenance of chromosomes
protein 1; n=1; Schizosaccharomyces pombe|Rep:
Structural maintenance of chromosomes protein 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1233
Score = 36.3 bits (80), Expect = 0.20
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARG 302
+G NG+GKSN AI FVL + SHLR + RG
Sbjct: 31 IGPNGAGKSNLMDAISFVLGVKSSHLRSTNVKELIYRG 68
>UniRef50_Q14683 Cluster: Structural maintenance of chromosomes
protein 1A; n=57; Eumetazoa|Rep: Structural maintenance
of chromosomes protein 1A - Homo sapiens (Human)
Length = 1233
Score = 36.3 bits (80), Expect = 0.20
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL ++ S+LR
Sbjct: 31 IGPNGSGKSNLMDAISFVLGEKTSNLR 57
>UniRef50_Q5A021 Cluster: Potential nuclear cohesin complex SMC
ATPase; n=2; Saccharomycetales|Rep: Potential nuclear
cohesin complex SMC ATPase - Candida albicans (Yeast)
Length = 1240
Score = 35.9 bits (79), Expect = 0.26
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGNR 308
+G NG+GKSN AI FVL HLR + RG R
Sbjct: 32 IGPNGAGKSNMMDAISFVLGVNSYHLRSQNLKDLIYRGRR 71
>UniRef50_Q7SEK5 Cluster: Putative uncharacterized protein
NCU02809.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU02809.1 - Neurospora crassa
Length = 702
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P D+I S I+RL+ L V ++ +LP
Sbjct: 493 WSQLVAPPPLQPPDWIRSRIRRLFLVSLGVPVDLDEILP 531
>UniRef50_Q2HE99 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 540
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P D+I S I+RL+ L V ++ +LP
Sbjct: 328 WSQLVAPPPLQPPDWIRSRIRRLFLVSLGVPVDLDEILP 366
>UniRef50_P32908 Cluster: Structural maintenance of chromosomes
protein 1; n=4; Saccharomycetaceae|Rep: Structural
maintenance of chromosomes protein 1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1225
Score = 35.5 bits (78), Expect = 0.35
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL +HLR
Sbjct: 32 IGPNGSGKSNMMDAISFVLGVRSNHLR 58
>UniRef50_A4RK72 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 506
Score = 35.1 bits (77), Expect = 0.46
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P D+I S I+RL+ L V ++ +LP
Sbjct: 320 WAQLVAPPPLQPPDWIRSRIRRLFLVSLGVPVDLDEILP 358
>UniRef50_O01789 Cluster: High incidence of males (Increased x
chromosome loss) protein 1, isoform a; n=3;
Caenorhabditis|Rep: High incidence of males (Increased x
chromosome loss) protein 1, isoform a - Caenorhabditis
elegans
Length = 1281
Score = 34.7 bits (76), Expect = 0.61
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL ++ S LR
Sbjct: 43 IGPNGSGKSNLMDAISFVLGEKPSSLR 69
>UniRef50_A5K5W0 Cluster: Chromosome associated protein, putative;
n=14; Plasmodium|Rep: Chromosome associated protein,
putative - Plasmodium vivax
Length = 1196
Score = 34.7 bits (76), Expect = 0.61
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 235 NLYSAMNSPISDLTQ-RLALLHEGTGPRVISAFVEIISDNSD 357
N+ A+ +SD+ + + LHEG G V S +VEII DNS+
Sbjct: 39 NILLAIEFILSDMCEYKQVFLHEGIGSAVRSCYVEIIFDNSE 80
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSD 251
VG NGSGKSN AI+F+LSD
Sbjct: 30 VGFNGSGKSNILLAIEFILSD 50
>UniRef50_A0DPG5 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_59,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1222
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSNF AIQFV + +R
Sbjct: 33 IGPNGSGKSNFIDAIQFVFGKRATSMR 59
>UniRef50_Q0U9D1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 433
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P D++ S I+RL+ L V ++ +LP
Sbjct: 255 WTQLVAPPPLQPPDWVRSRIRRLFLVSLGVPVDLDEILP 293
>UniRef50_A4HN20 Cluster: Structural maintenance of chromosome (SMC)
family protein, putative; n=3; Leishmania|Rep:
Structural maintenance of chromosome (SMC) family
protein, putative - Leishmania braziliensis
Length = 1322
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAG 287
VG NG+GKSN A+ FVLS + R S G
Sbjct: 32 VGPNGAGKSNLMDALSFVLSSSVTPARASSMRG 64
>UniRef50_Q8NDV3 Cluster: Structural maintenance of chromosomes
protein 1B; n=15; Euteleostomi|Rep: Structural
maintenance of chromosomes protein 1B - Homo sapiens
(Human)
Length = 1235
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN A+ FV+ ++ ++LR
Sbjct: 31 IGPNGSGKSNVMDALSFVMGEKIANLR 57
>UniRef50_Q6C5S3 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1220
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL S LR
Sbjct: 32 IGPNGSGKSNMMDAISFVLGVRSSQLR 58
>UniRef50_Q5KM80 Cluster: Cohesin complex subunit psm1, putative;
n=2; Filobasidiella neoformans|Rep: Cohesin complex
subunit psm1, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1202
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGNR 308
+G NG+GKSN AI FVL + + LR RG R
Sbjct: 31 IGPNGAGKSNLMDAISFVLGVKSAQLRSTQLKDLIYRGRR 70
>UniRef50_Q0LKW2 Cluster: MukB N-terminal domain/M protein repeat
protein; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep:
MukB N-terminal domain/M protein repeat protein -
Herpetosiphon aurantiacus ATCC 23779
Length = 1093
Score = 33.1 bits (72), Expect = 1.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 168 INDIM*SVGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAA 284
+ D + G NGSGKS+ A+Q VL + +R +SAA
Sbjct: 22 VQDSLYLAGHNGSGKSSILDALQLVLVADLGRVRFNSAA 60
>UniRef50_Q60TG3 Cluster: Putative uncharacterized protein CBG20484;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG20484 - Caenorhabditis
briggsae
Length = 531
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL + + LR
Sbjct: 72 IGPNGSGKSNLMDAISFVLGERPTSLR 98
>UniRef50_A2DH38 Cluster: SMC flexible hinge domain protein,
putative; n=1; Trichomonas vaginalis G3|Rep: SMC
flexible hinge domain protein, putative - Trichomonas
vaginalis G3
Length = 1135
Score = 33.1 bits (72), Expect = 1.9
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHL 266
+G NGSGK+ F AI+FVL + +S L
Sbjct: 31 LGLNGSGKTTLFQAIEFVLLENYSML 56
>UniRef50_Q6FUN1 Cluster: Candida glabrata strain CBS138 chromosome
F complete sequence; n=2; Saccharomycetales|Rep: Candida
glabrata strain CBS138 chromosome F complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1223
Score = 33.1 bits (72), Expect = 1.9
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL S LR
Sbjct: 32 IGPNGSGKSNLMDAISFVLGIRSSSLR 58
>UniRef50_Q2U6F8 Cluster: Predicted protein; n=8;
Eurotiomycetidae|Rep: Predicted protein - Aspergillus
oryzae
Length = 401
Score = 33.1 bits (72), Expect = 1.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P +++ S I+RL+ L V ++ +LP
Sbjct: 223 WSQLVAPPPLQPQNWVKSRIRRLFLVSLGVPVDLDEILP 261
>UniRef50_Q5E723 Cluster: Oligopeptide transport ATP-binding protein
OppD; n=1; Vibrio fischeri ES114|Rep: Oligopeptide
transport ATP-binding protein OppD - Vibrio fischeri
(strain ATCC 700601 / ES114)
Length = 250
Score = 32.7 bits (71), Expect = 2.5
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 144 SKLL*SLLINDIM*SVGRNGSGKSNFFHAIQFVLSDEFS 260
S L SL +I+ +G +GSGKS+ +AI LSD+F+
Sbjct: 27 SNLSLSLKQGEILGIIGASGSGKSSLINAIMQALSDDFT 65
>UniRef50_A1TJY9 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 712
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 144 SKLL*SLLINDIM*SVGRNGSGKSNFFHAIQFVLSD 251
+KLL IN I +G NGSGK+N F AI+ +L D
Sbjct: 17 TKLLFQKGINTI---IGENGSGKTNLFRAIRLLLDD 49
>UniRef50_A4RUQ7 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1225
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
VG NGSGKSN AI FVL + LR
Sbjct: 38 VGPNGSGKSNLMDAISFVLGVRSAQLR 64
>UniRef50_Q7QYX0 Cluster: GLP_164_29061_32786; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_164_29061_32786 - Giardia lamblia
ATCC 50803
Length = 1241
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NG+GKSNF+ AI F L D L+
Sbjct: 40 IGINGAGKSNFYSAILFALMDPLYDLK 66
>UniRef50_Q8R9W7 Cluster: Chromosome segregation ATPases; n=3;
Thermoanaerobacter|Rep: Chromosome segregation ATPases -
Thermoanaerobacter tengcongensis
Length = 1189
Score = 32.3 bits (70), Expect = 3.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE-FSHLRPDSAAGPTARGNRP*SHFGFC 332
VG NGSGKSN AI+ VL ++ LR G+ GFC
Sbjct: 30 VGPNGSGKSNISDAIRLVLGEQSIKSLRGSKLEDVIFAGSETRKPLGFC 78
>UniRef50_Q6KHN4 Cluster: Segregation of chromosomes protein; n=1;
Mycoplasma mobile|Rep: Segregation of chromosomes
protein - Mycoplasma mobile
Length = 974
Score = 32.3 bits (70), Expect = 3.3
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE-FSHLRPDS 278
VG NGSGKSN AI++VL ++ F LR D+
Sbjct: 30 VGPNGSGKSNINDAIRWVLGEQSFKALRGDN 60
>UniRef50_Q4N928 Cluster: SMC protein, putative; n=2; Theileria|Rep:
SMC protein, putative - Theileria parva
Length = 1322
Score = 32.3 bits (70), Expect = 3.3
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL S LR
Sbjct: 101 IGPNGSGKSNLMDAISFVLCIRTSTLR 127
>UniRef50_A6SJQ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 546
Score = 32.3 bits (70), Expect = 3.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P ++I S I+RL+ L + + +LP
Sbjct: 371 WSQLVAPPPLQPPNWIRSRIRRLFLVSLGIPVSLDEILP 409
>UniRef50_Q3ABE6 Cluster: MukB N-terminal domain/M protein repeat
protein; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: MukB N-terminal domain/M protein repeat
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 1101
Score = 31.9 bits (69), Expect = 4.3
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 192 GRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAG 287
G NGSGKS AIQ+VL + +R +S+AG
Sbjct: 35 GDNGSGKSTILDAIQYVLVADQRKVRFNSSAG 66
>UniRef50_Q0LFN7 Cluster: Chromosome segregation protein SMC; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Chromosome
segregation protein SMC - Herpetosiphon aurantiacus ATCC
23779
Length = 1192
Score = 31.9 bits (69), Expect = 4.3
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE-FSHLR 269
VG NGSGKSN AI++VL ++ FS LR
Sbjct: 30 VGPNGSGKSNVTDAIRWVLGEQSFSALR 57
>UniRef50_A0UWP3 Cluster: SMC protein-like; n=1; Clostridium
cellulolyticum H10|Rep: SMC protein-like - Clostridium
cellulolyticum H10
Length = 1036
Score = 31.9 bits (69), Expect = 4.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 168 INDIM*SVGRNGSGKSNFFHAIQFVLSDEFSHLRPDSA 281
I D++ NG GK++FF AI++ ++DE L+ A
Sbjct: 32 IADLVVIYAPNGYGKTSFFDAIEWAITDEIGRLKSTDA 69
>UniRef50_Q9M1T3 Cluster: Structural maintenance of chromosomes
(SMC)-like protein; n=6; Magnoliophyta|Rep: Structural
maintenance of chromosomes (SMC)-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1265
Score = 31.9 bits (69), Expect = 4.3
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL LR
Sbjct: 38 IGPNGSGKSNLMDAISFVLGVRTGQLR 64
>UniRef50_A2FBW6 Cluster: SMC family, C-terminal domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: SMC family,
C-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 1118
Score = 31.9 bits (69), Expect = 4.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 171 NDIM*SVGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+D + +G N SGKSN F AI FVL+ S +R
Sbjct: 24 DDFVAVIGSNASGKSNCFDAICFVLAAPASSMR 56
>UniRef50_Q8SQJ6 Cluster: CHROMOSOME SEGREGATION PROTEIN OF THE SMC
FAMILY; n=1; Encephalitozoon cuniculi|Rep: CHROMOSOME
SEGREGATION PROTEIN OF THE SMC FAMILY - Encephalitozoon
cuniculi
Length = 1017
Score = 31.9 bits (69), Expect = 4.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE 254
VGRNGSGKS+ A+ FVL E
Sbjct: 30 VGRNGSGKSSIVSAVHFVLCGE 51
>UniRef50_A6LLE9 Cluster: Chromosome segregation protein SMC; n=1;
Thermosipho melanesiensis BI429|Rep: Chromosome
segregation protein SMC - Thermosipho melanesiensis
BI429
Length = 1153
Score = 31.5 bits (68), Expect = 5.7
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSD 251
VG NGSGKSN AIQ+VL +
Sbjct: 32 VGPNGSGKSNIVEAIQWVLGE 52
>UniRef50_Q5CYL8 Cluster: SMC4'SMC4, chromosomal ATpase with giant
coiled coil regions'; n=2; Cryptosporidium|Rep:
SMC4'SMC4, chromosomal ATpase with giant coiled coil
regions' - Cryptosporidium parvum Iowa II
Length = 1366
Score = 31.5 bits (68), Expect = 5.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
VG NGSGKSN A+ FV H+R
Sbjct: 100 VGPNGSGKSNVIDAMLFVFGKRAKHMR 126
>UniRef50_Q4Q6S2 Cluster: V-type ATPase, C subunit, putative; n=5;
Trypanosomatidae|Rep: V-type ATPase, C subunit, putative
- Leishmania major
Length = 224
Score = 31.5 bits (68), Expect = 5.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 214 LLPEPLR-PTDYIMSFIKRLYNNLLSVTLECLGLLPVLCAVVF 89
+LP P R P D M + L +L + + G++P LC VF
Sbjct: 7 VLPTPTRLPPDDAMHVVGGLIRYILIIVIVVFGIIPALCGTVF 49
>UniRef50_Q4N043 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 992
Score = 31.5 bits (68), Expect = 5.7
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSD 251
VG NGSGKSN A+ FVL D
Sbjct: 30 VGLNGSGKSNVLLAVSFVLGD 50
>UniRef50_Q8SS38 Cluster: CHROMOSOME SEGREGATION PROTEIN; n=1;
Encephalitozoon cuniculi|Rep: CHROMOSOME SEGREGATION
PROTEIN - Encephalitozoon cuniculi
Length = 1162
Score = 31.5 bits (68), Expect = 5.7
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSA 281
VG NGSGKSN A+ F L +LR SA
Sbjct: 30 VGPNGSGKSNVMDAVMFCLGVGSRYLRGSSA 60
>UniRef50_Q8SRK4 Cluster: CUT3-LIKE CHROMOSOME SEGREGATION PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: CUT3-LIKE CHROMOSOME
SEGREGATION PROTEIN - Encephalitozoon cuniculi
Length = 1112
Score = 31.5 bits (68), Expect = 5.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAA 284
VG NGSGKSN +I FVL +R S A
Sbjct: 40 VGANGSGKSNIIDSILFVLGFRARRMRHSSLA 71
>UniRef50_Q1DYS9 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 562
Score = 31.5 bits (68), Expect = 5.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 226 WKKLLLPEPLRPTDYIMSFIKRLYNNLLSVTLECLGLLP 110
W +L+ P PL+P ++ S I+RL+ L V ++ +LP
Sbjct: 339 WSQLVAPPPLQPPNWTKSRIRRLFLVSLGVPVDLDEILP 377
>UniRef50_P41004 Cluster: Structural maintenance of chromosomes
protein 4; n=2; Schizosaccharomyces pombe|Rep:
Structural maintenance of chromosomes protein 4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1324
Score = 31.5 bits (68), Expect = 5.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAA 284
VG NGSGKSN A+ FV S LR A+
Sbjct: 154 VGPNGSGKSNVIDALLFVFGFRASKLRQSKAS 185
>UniRef50_P75361 Cluster: Protein P115 homolog; n=6; Mycoplasma|Rep:
Protein P115 homolog - Mycoplasma pneumoniae
Length = 982
Score = 31.5 bits (68), Expect = 5.7
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSD-EFSHLRPDS 278
VG NGSGKSN A+++VL + HLR S
Sbjct: 31 VGPNGSGKSNVVDALKWVLGERSMKHLRSKS 61
>UniRef50_Q88WJ9 Cluster: Cell division protein Smc; n=1;
Lactobacillus plantarum|Rep: Cell division protein Smc -
Lactobacillus plantarum
Length = 1185
Score = 31.1 bits (67), Expect = 7.5
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDE 254
VG NGSGKSN AI++VL ++
Sbjct: 30 VGPNGSGKSNIIEAIRWVLGEQ 51
>UniRef50_Q81ZN4 Cluster: SMC protein; n=2; Enterococcus|Rep: SMC
protein - Enterococcus faecalis (Streptococcus faecalis)
Length = 1192
Score = 31.1 bits (67), Expect = 7.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 171 NDIM*SVGRNGSGKSNFFHAIQFVLSDE 254
+D+ VG NGSGKSN A+++VL ++
Sbjct: 24 DDVTAVVGPNGSGKSNITEAVRWVLGEQ 51
>UniRef50_Q7UYP8 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 392
Score = 31.1 bits (67), Expect = 7.5
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 171 NDIM*SVGRNGSGKSNFFHAIQFV 242
+D+ VGR+G+GKSNF A++F+
Sbjct: 21 SDVTVLVGRSGTGKSNFVEAVRFL 44
>UniRef50_Q5SJV3 Cluster: Chromosome segregation SMC protein; n=2;
Thermus thermophilus|Rep: Chromosome segregation SMC
protein - Thermus thermophilus (strain HB8 / ATCC 27634
/ DSM 579)
Length = 1008
Score = 31.1 bits (67), Expect = 7.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI+FV LR
Sbjct: 34 IGPNGSGKSNLVEAIRFVTGSRAQDLR 60
>UniRef50_Q4A588 Cluster: Putative ABC transporter ATP-binding
protein P115-like protein; n=1; Mycoplasma synoviae
53|Rep: Putative ABC transporter ATP-binding protein
P115-like protein - Mycoplasma synoviae (strain 53)
Length = 980
Score = 31.1 bits (67), Expect = 7.5
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFS-HLRPDSAAGPTARGNR 308
+G NGSGKSN AI++VL ++ S LR +S + G++
Sbjct: 30 IGPNGSGKSNINDAIKWVLGEQSSKELRGNSMSDVIFSGSK 70
>UniRef50_Q1PYY7 Cluster: Similar to nickel insertase (CooC) of
CODH/ACS complex; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nickel insertase (CooC)
of CODH/ACS complex - Candidatus Kuenenia
stuttgartiensis
Length = 235
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 184 SQWDVMVQARVTFSTPFNLYSAMNSPISDLTQRLALLHEGTGPRVISA 327
SQ +++ R S + + +N +SDL ++L+L HEG V+ A
Sbjct: 36 SQMKDLIKERTGASDEYGKFFKLNPTVSDLPEKLSLEHEGIKLMVLGA 83
>UniRef50_A6TLK7 Cluster: SMC domain protein; n=1; Alkaliphilus
metalliredigens QYMF|Rep: SMC domain protein -
Alkaliphilus metalliredigens QYMF
Length = 438
Score = 31.1 bits (67), Expect = 7.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPD 275
+G NGSGKSN I + S + PD
Sbjct: 31 IGNNGSGKSNILEVIAIIFSSVLDDVNPD 59
>UniRef50_A6Q876 Cluster: DNA double-strand break repair protein;
n=1; Sulfurovum sp. NBC37-1|Rep: DNA double-strand break
repair protein - Sulfurovum sp. (strain NBC37-1)
Length = 788
Score = 31.1 bits (67), Expect = 7.5
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVL 245
+GRNGSGKS F AI F L
Sbjct: 29 IGRNGSGKSTIFDAITFAL 47
>UniRef50_Q45N98 Cluster: Structural maintenance of chromosome 3;
n=1; Toxoplasma gondii|Rep: Structural maintenance of
chromosome 3 - Toxoplasma gondii
Length = 1491
Score = 31.1 bits (67), Expect = 7.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 274 TQRLALLHEGTGPRVISAFVEIISDNSDNRIPIEXD 381
T+R LLHEG RV V+++ N D R+ + D
Sbjct: 56 TERRMLLHEGMNERVSDGSVQVVLANEDRRLCMYDD 91
>UniRef50_Q3SE63 Cluster: Structural maintenance of chromosomes 1;
n=2; Paramecium tetraurelia|Rep: Structural maintenance
of chromosomes 1 - Paramecium tetraurelia
Length = 1267
Score = 31.1 bits (67), Expect = 7.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NG GKSN AIQFVL +R
Sbjct: 69 IGPNGGGKSNVLDAIQFVLGISIRSMR 95
>UniRef50_Q5VZV1 Cluster: OTTHUMP00000018663; n=13; Amniota|Rep:
OTTHUMP00000018663 - Homo sapiens (Human)
Length = 264
Score = 31.1 bits (67), Expect = 7.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 160 LYNNLLSVTLECLGLLPVLCAVVF-V*IXKKLPKTKFYYD 44
L NLL TL+C LP + +V+ + K PK+ FYYD
Sbjct: 149 LQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 188
>UniRef50_UPI00015C6170 Cluster: hypothetical protein CKO_03997;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_03997 - Citrobacter koseri ATCC BAA-895
Length = 433
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 162 LLINDIM*SVGRNGSGKSNFFHAIQFVLS 248
LLIN + G NG+GKS+F A+ F+ S
Sbjct: 43 LLINKVAVIYGANGAGKSSFVEALDFLQS 71
>UniRef50_Q765Q4 Cluster: Meiosis-specific cohesin subunit SMC1
beta; n=1; Oryzias latipes|Rep: Meiosis-specific cohesin
subunit SMC1 beta - Oryzias latipes (Medaka fish)
(Japanese ricefish)
Length = 1082
Score = 30.7 bits (66), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN A+ F + + + LR
Sbjct: 31 IGTNGSGKSNVMDALSFAIGERAASLR 57
>UniRef50_A0LBT8 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 410
Score = 30.7 bits (66), Expect = 9.9
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLRPDSAAGPTARGNR 308
V RNG GKS A+ LS HL PT RGNR
Sbjct: 29 VSRNGGGKSALLDALALALSPYLKHL-------PTVRGNR 61
>UniRef50_A7Q1S8 Cluster: Chromosome chr7 scaffold_44, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_44, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1205
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NG+GKSN AI FVL LR
Sbjct: 37 IGPNGAGKSNLMDAISFVLGVRTGQLR 63
>UniRef50_A5H621 Cluster: SMC1; n=5; Magnoliophyta|Rep: SMC1 -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 263
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NG+GKSN AI FVL LR
Sbjct: 21 IGPNGAGKSNLMDAISFVLGVRTGQLR 47
>UniRef50_Q38DK9 Cluster: Structural maintenance of chromosome 1,
putative; n=3; Trypanosoma|Rep: Structural maintenance
of chromosome 1, putative - Trypanosoma brucei
Length = 1275
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 168 INDIM*SVGRNGSGKSNFFHAIQFVLS 248
+ D VG NGSGKSN A+ FVLS
Sbjct: 25 LKDFTCIVGPNGSGKSNLMDALCFVLS 51
>UniRef50_A7AQK3 Cluster: Structural maintenance of chromosome
1-like protein, putative; n=1; Babesia bovis|Rep:
Structural maintenance of chromosome 1-like protein,
putative - Babesia bovis
Length = 1328
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
+G NGSGKSN AI FVL + LR
Sbjct: 97 IGPNGSGKSNIMDAISFVLCVNSTVLR 123
>UniRef50_A2EKI4 Cluster: SMC flexible hinge domain protein,
putative; n=1; Trichomonas vaginalis G3|Rep: SMC
flexible hinge domain protein, putative - Trichomonas
vaginalis G3
Length = 1169
Score = 30.7 bits (66), Expect = 9.9
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 192 GRNGSGKSNFFHAIQFVLS-DEFSHLRPDSAAG 287
G NGSGKSN AI FVL S+LR + G
Sbjct: 32 GLNGSGKSNVLDAICFVLGMSNISNLRAEGLQG 64
>UniRef50_A2DSN1 Cluster: SMC family, C-terminal domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: SMC family,
C-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 1202
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 189 VGRNGSGKSNFFHAIQFVLSDEFSHLR 269
VG NGSGKSN A+ FV + H+R
Sbjct: 38 VGPNGSGKSNVIDAMLFVFGYKARHMR 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,718,120
Number of Sequences: 1657284
Number of extensions: 6816785
Number of successful extensions: 18886
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 18401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18871
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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