Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O12
         (383 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   7.4  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 351 VVRYNFNKSRNDSRA 307
           ++R+NFN+  N +RA
Sbjct: 396 LLRHNFNRHLNSNRA 410


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 351 VVRYNFNKSRNDSRA 307
           ++R+NFN+  N +RA
Sbjct: 403 LLRHNFNRHLNSNRA 417


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 65  REFFLDLNEDNCT 103
           R  FLDL EDN T
Sbjct: 466 RRAFLDLKEDNKT 478


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 342 YNFNKSRNDSRACSL 298
           YNFN++   S+ C L
Sbjct: 424 YNFNENTIHSKLCKL 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,846
Number of Sequences: 336
Number of extensions: 1671
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)