Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O11
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   238   3e-65
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.13 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    27   0.13 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  238 bits (582), Expect = 3e-65
 Identities = 114/125 (91%), Positives = 121/125 (96%)
 Frame = +2

Query: 278 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 457
           KIRYESLT+PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKA
Sbjct: 51  KIRYESLTNPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKA 110

Query: 458 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSG 637
           FMEALQAGADISMIGQFGVGFYS+YLVAD+VTV SK+NDDEQYVWESSAGGSFTV  D G
Sbjct: 111 FMEALQAGADISMIGQFGVGFYSAYLVADKVTVVSKNNDDEQYVWESSAGGSFTVTQDRG 170

Query: 638 EPLGR 652
           EPLGR
Sbjct: 171 EPLGR 175



 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +1

Query: 202 IINTFYSNKEIFLRELISNSSDAL 273
           IINTFYSNKEIFLRELISNSSDAL
Sbjct: 26  IINTFYSNKEIFLRELISNSSDAL 49



 Score = 37.9 bits (84), Expect = 7e-05
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +3

Query: 120 MPEEMETQPAEVETFAFQAEIAQLMS 197
           MPEE   Q  +VETFAFQAEIAQLMS
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMS 24


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 158 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYQTLVSVL 21
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 122


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 158 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYQTLVSVL 21
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 78


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 422 CSPNRPWSYQYRYR 381
           C P RPW   Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 276 TKSGMNLSRIRQNSIVAKSCTSRSFPTRTRALL 374
           ++SG+N      N++ A +   + +PT T  +L
Sbjct: 368 SQSGINYKDTNDNNVSAVTTQHQGYPTNTVTIL 400


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 215 HQHAWIWLVWLLSQ 228



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 193 CPXIINTFYSNKEIFLRELISNSSDAL 273
           CP   N FY+ +  ++   ++N  D L
Sbjct: 606 CPEGFNEFYNQRRRWMPSTMANILDLL 632


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 193 CPXIINTFYSNKEIFLRELISNSSDAL 273
           CP   N FY+ +  ++   ++N  D L
Sbjct: 839 CPEGFNEFYNQRRRWMPSTMANILDLL 865


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 193 CPXIINTFYSNKEIFLRELISNSSDAL 273
           CP   N FY+ +  ++   ++N  D L
Sbjct: 839 CPEGFNEFYNQRRRWMPSTMANILDLL 865


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 487 HQHDWTVRCWLLLQ 528
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 280 FVLKRPMNWKSAHEGKFLCWSKR 212
           F+LK P N   A +G  L   KR
Sbjct: 54  FILKNPPNLNPAVQGSSLTEGKR 76


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -3

Query: 643 GLTAVWADCERASCRR 596
           G    W +C++A+C +
Sbjct: 881 GKPTCWRECDKATCEK 896


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -2

Query: 422 CSPNRPWSYQYRYR 381
           C P  PW   Y YR
Sbjct: 481 CDPYTPWHTFYDYR 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,330
Number of Sequences: 336
Number of extensions: 3228
Number of successful extensions: 30
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)