Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O11
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 186 2e-48
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 27 1.8
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 26 4.1
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 5.5
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 7.2
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 7.2
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 7.2
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|... 25 7.2
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.5
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 186 bits (453), Expect = 2e-48
Identities = 88/122 (72%), Positives = 102/122 (83%)
Frame = +2
Query: 278 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 457
KIRY+SL+DP LD+ K+L+I+I P+K L+I DTGIGMTK DL+NNLG IAKSGTK
Sbjct: 45 KIRYQSLSDPHALDAEKDLFIRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQ 104
Query: 458 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSG 637
FMEA +GADISMIGQFGVGFYS+YLVAD+V V SKHNDDEQY+WESSAGGSFTV D+
Sbjct: 105 FMEAAASGADISMIGQFGVGFYSAYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTD 164
Query: 638 EP 643
P
Sbjct: 165 GP 166
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 202 IINTFYSNKEIFLRELISNSSDAL 273
IINT YSNKEIFLRELISN+SDAL
Sbjct: 20 IINTVYSNKEIFLRELISNASDAL 43
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 AEVETFAFQAEIAQLMS 197
+ ETF F+AEI+QLMS
Sbjct: 2 SNTETFKFEAEISQLMS 18
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = -1
Query: 459 KALVPDFAMVPKLFTKSALVIPIPVSMIVRVPSFLLGMILMYSSLPLSSFDGS 301
KA++P F + +AL+ PI ++ I +F+ IL + S PLS FDGS
Sbjct: 486 KAVIPIFTNQVS-YINNALIRPI-IAYINSTRTFI--PILCHVSKPLSDFDGS 534
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 436 DGSQIVHQIGLGHTNTGIDDRKSALVLVGNDLDVQL 329
DG V I G +DDR+ L+ + NDL+V L
Sbjct: 2 DGKPQVEVIVNGQVVPNLDDREYRLIKLENDLEVLL 37
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 298 HGSVKTR*WQRAVHQDHSQ-QERGHSYDHRYRYWYDQGRFGEQF 426
H S K +R+ D + +ER H+ +R+R YD G F + +
Sbjct: 193 HSSDKREHSRRSYRNDRNNWRERTHNDRYRHRDKYDSGYFKKHY 236
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 340 QDHSQQERGHSYDHRYRYWYDQGRFGEQF 426
+DH++++ H+ +Y YD R E +
Sbjct: 603 KDHTKEQAWHAMQQGIKYMYDNWRIWENY 631
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 289 IPDFVLKRPMNWKSAHEGKFLCWSKRC**XRDIS*AISA-WNAKVSTSAGCVS 134
+ D V ++ W ++ +G L W +D+ A+S ++ +S S+ C S
Sbjct: 307 VSDIVARQSFIWSTSRDGSILRWKDEPLFNQDVGAALSKHTSSHLSVSSDCPS 359
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 302 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLG 430
DPSK ++Y K+ + + L D+GI ++ L+ +G
Sbjct: 2472 DPSKAVRKPKIYSKVSTEERDFNLEQFDSGIDLSVKFLLEGIG 2514
>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 277 VLKRPMNWKSAHEGKFLCWSK 215
+LK+P N +S E + + WSK
Sbjct: 6 ILKKPKNAQSTQEKQLITWSK 26
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -1
Query: 423 LFTKSALVIPIPVSMIVRVPSFLLGMILM 337
LFT+ L IP+ +S+++ S+L+ ++M
Sbjct: 766 LFTELCLTIPVRLSLLLPYMSYLMRPLVM 794
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,674,672
Number of Sequences: 5004
Number of extensions: 55024
Number of successful extensions: 153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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