Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O11
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 112 3e-25
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10) 98 6e-21
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 72 4e-13
SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11623| Best HMM Match : ABC1 (HMM E-Value=0) 29 3.3
SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6) 29 4.4
SB_41595| Best HMM Match : DUF1153 (HMM E-Value=1.7) 28 7.6
SB_37714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_24796| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_53546| Best HMM Match : DUF1153 (HMM E-Value=2) 28 7.6
SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7) 28 7.6
SB_5665| Best HMM Match : DUF1153 (HMM E-Value=1.7) 28 7.6
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 112 bits (269), Expect = 3e-25
Identities = 49/60 (81%), Positives = 57/60 (95%)
Frame = +2
Query: 473 QAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGR 652
+AGADISMIGQFGVGFYS+YLVA++V V +KHNDDEQY+WES+AGGSFTV+ DSGEPLGR
Sbjct: 59 KAGADISMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYIWESAAGGSFTVKRDSGEPLGR 118
>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
Length = 739
Score = 97.9 bits (233), Expect = 6e-21
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Frame = +2
Query: 278 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 457
K+R+ LT ++ L I I ++ GT TI D G+GMT+ +L+++LG IAKSG+K
Sbjct: 100 KVRHFFLTGKDVSETETSLEIMIETDQEAGTFTIQDNGVGMTEEELMDHLGVIAKSGSKV 159
Query: 458 FMEALQAGADIS---MIGQFGVGFYSSYLVADRVTVHSK--HNDDEQYVWESSAGGSFTV 622
FME L+ A S +IGQFGVGFYS+++VAD+V V++K + + Y W S GS+
Sbjct: 160 FMEKLKNEARSSHENIIGQFGVGFYSTFMVADKVDVYTKSYQPNSQGYFWTSDGSGSYEY 219
Query: 623 RPDSGEPLG 649
+G G
Sbjct: 220 AEANGVARG 228
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/60 (61%), Positives = 42/60 (70%)
Frame = +2
Query: 278 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 457
KIR SLTD + DSG EL IKI +K L + DTGIGMTK +L+ NLGTIAKSGT A
Sbjct: 117 KIRLMSLTDKTAFDSGDELSIKIKADKENNILHVTDTGIGMTKEELIKNLGTIAKSGTIA 176
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 202 IINTFYSNKEIFLRELISNSSDAL 273
IIN+ Y NKEIFLRELISNSSDAL
Sbjct: 92 IINSLYRNKEIFLRELISNSSDAL 115
>SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +2
Query: 308 SKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 478
+K+ G+E+ + ++NE ++ +G ++ D++ N+G T++ +E +A
Sbjct: 265 AKISDGQEIKFSVFIDENEYRSICLNLQVGPSEPDVLKNIGVTRMPETRSNVENCRA 321
>SB_11623| Best HMM Match : ABC1 (HMM E-Value=0)
Length = 780
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 331 AVHQDHSQQERGHSYDHRYRYWYDQ----GRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 498
AV H+ RGHS+ W G F + FG+ W + G+S CR
Sbjct: 150 AVGVPHAHSYRGHSFRRGATTWAFHLGIPGEFIQVFGD----WASDAYRGNSL-CRANCQ 204
Query: 499 WTVRCWLLLQ 528
W +RC ++ Q
Sbjct: 205 WLIRCVVIFQ 214
>SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6)
Length = 433
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 577 VVIVFRVNS-HAVSDQVTGVEANTELSNHADVGTCLKSLHESFSTRFRDGSQIV 419
+V+ + N+ H ++ QV + + + H G CLKSL F + RDG V
Sbjct: 374 IVLSLKFNTGHEMNVQVQSKLYSVKDNTHVTWGACLKSL--DFECKMRDGQSFV 425
>SB_41595| Best HMM Match : DUF1153 (HMM E-Value=1.7)
Length = 289
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 116 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 154
>SB_37714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 648 PRGSPLSGRTVNEPPAEDSHTYCSSSLCLE*TVTRSATK 532
PRG GR V P +D HT + C + T R TK
Sbjct: 358 PRGRWPLGRIVETYPGQDGHTRVAKVQCGDKTYIRPITK 396
>SB_24796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 116 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 154
>SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 479 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 517
>SB_53546| Best HMM Match : DUF1153 (HMM E-Value=2)
Length = 306
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 116 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 154
>SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7)
Length = 412
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 116 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 154
>SB_5665| Best HMM Match : DUF1153 (HMM E-Value=1.7)
Length = 246
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 EREGFNLRWLCLHFFRHFL--YCFLFNSHKMTRGFLTHVFQSA 48
ERE +L W C HF + L L HK LTHVF +A
Sbjct: 116 EREALSLVWACEHFQMYLLGTKFKLITDHKP----LTHVFNNA 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,149,207
Number of Sequences: 59808
Number of extensions: 417353
Number of successful extensions: 1224
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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