Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O05
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   281   4e-76
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   281   4e-76
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   281   4e-76
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   281   4e-76
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   238   4e-63
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   238   4e-63
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.8  
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    30   3.2  
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    30   3.2  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  281 bits (690), Expect = 4e-76
 Identities = 136/170 (80%), Positives = 153/170 (90%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 646
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  281 bits (690), Expect = 4e-76
 Identities = 136/170 (80%), Positives = 153/170 (90%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 646
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  281 bits (690), Expect = 4e-76
 Identities = 136/170 (80%), Positives = 153/170 (90%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 646
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  281 bits (690), Expect = 4e-76
 Identities = 136/170 (80%), Positives = 153/170 (90%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 646
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  238 bits (583), Expect = 4e-63
 Identities = 116/146 (79%), Positives = 131/146 (89%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKV 574
           RVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  238 bits (583), Expect = 4e-63
 Identities = 116/146 (79%), Positives = 131/146 (89%)
 Frame = +2

Query: 137 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELE 316
           +QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRELE
Sbjct: 23  AQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRELE 82

Query: 317 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 496
           KKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 497 RVKLDGSQLIKVHLDKNQQTTIEHKV 574
           RVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 230 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 409
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 410 RPRSRT 427
           +P ++T
Sbjct: 625 QPVAQT 630


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +2

Query: 335  HVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI---LEDLVFPAEIVGKRIRVK 505
            HV   GDR+    P     +         R++ + YD I   L+ L+    +   R++  
Sbjct: 1200 HVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRELQQLLGGESVENLRVQEN 1259

Query: 506  LDGSQLIKVHLDKNQQTTIEHKVD 577
             DGS +++  L    +  +   ++
Sbjct: 1260 FDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +2

Query: 335  HVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI---LEDLVFPAEIVGKRIRVK 505
            HV   GDR+    P     +         R++ + YD I   L+ L+    +   R++  
Sbjct: 1317 HVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRELQQLLGGESVENLRVQEN 1376

Query: 506  LDGSQLIKVHLDKNQQTTIEHKVD 577
             DGS +++  L    +  +   ++
Sbjct: 1377 FDGSAIVRFELHNEAKVDLAFAIE 1400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,073,660
Number of Sequences: 53049
Number of extensions: 565993
Number of successful extensions: 1464
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)