Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O04
(543 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 167 2e-40
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 151 8e-36
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 126 2e-28
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 110 2e-23
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 108 7e-23
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 108 7e-23
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 90 4e-17
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 83 3e-15
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 82 9e-15
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 80 4e-14
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 79 9e-14
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 76 5e-13
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 71 1e-11
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 68 2e-10
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 58 1e-07
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 58 1e-07
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 56 5e-07
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 50 3e-05
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 48 1e-04
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 1.1
UniRef50_UPI0000E2253B Cluster: PREDICTED: hypothetical protein;... 33 4.3
UniRef50_Q0AC16 Cluster: Putative uncharacterized protein; n=5; ... 33 4.3
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 33 4.3
UniRef50_Q0BPT6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3; Alphapr... 32 9.8
UniRef50_Q8SUH1 Cluster: Similarity to KINESIN-LIKE PROTEIN A; n... 32 9.8
UniRef50_Q9HXW0 Cluster: UPF0341 protein PA3680; n=34; Proteobac... 32 9.8
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 167 bits (405), Expect = 2e-40
Identities = 88/146 (60%), Positives = 105/146 (71%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
MGRMHAPGKG+SQSALPYRRSVP + + + L ++ P ++
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDV-KEQIYKLAKKGLTPSQIGVILRDSHG 59
Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
+ + + I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+E
Sbjct: 60 VAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIE 119
Query: 420 SRIHRLARYYKTKSVLPPNWKYESST 497
SRIHRLARYYKTK VLPPNWKYESST
Sbjct: 120 SRIHRLARYYKTKRVLPPNWKYESST 145
Score = 93.9 bits (223), Expect = 2e-18
Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 151 bits (367), Expect = 8e-36
Identities = 82/146 (56%), Positives = 97/146 (66%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
MGRMH+ GKGIS SALPY+RS P P ++ P ++
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKT-TPQDVDESICKFAKKGLTPSQIGVILRDSHG 59
Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
+P+ S + I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVE
Sbjct: 60 IPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVE 119
Query: 420 SRIHRLARYYKTKSVLPPNWKYESST 497
SRIHRLARYYK LPP WKYES+T
Sbjct: 120 SRIHRLARYYKKTKKLPPVWKYESTT 145
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/60 (63%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LK T DV E I K KKGLTPSQIGV+LRDSHG+ QV+ VTG KILR
Sbjct: 14 SALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILR 73
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 126 bits (305), Expect = 2e-28
Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 3/149 (2%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNL---ERRVSLPHKLV*C*GI 230
M RMH G+G + SALPYRR+ P L RN + R+ +P ++
Sbjct: 1 MVRMHGNGRGKASSALPYRRTPPAW----LKIASRNVVKMVCKSSRKGMMPSQIGMELRD 56
Query: 231 HMELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 410
M + + + ++ I+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLI
Sbjct: 57 SMGIAQVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLI 116
Query: 411 LVESRIHRLARYYKTKSVLPPNWKYESST 497
LVESRIHRLARYYK LPP WKYESST
Sbjct: 117 LVESRIHRLARYYKRVKQLPPTWKYESST 145
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALP-PQCPXPGLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LK+ + +V + + K +KG+ PSQIG+ LRDS G+AQV+ VTG+KILR
Sbjct: 14 SALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIAQVKNVTGRKILR 73
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 110 bits (264), Expect = 2e-23
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +3
Query: 84 KGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS*L 263
KGI+ S +P+ R+ P + + NL ++ +P ++ +P +
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKI-NEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIA 64
Query: 264 AKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 443
+ I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+R
Sbjct: 65 GRNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSR 124
Query: 444 YYKTKSVLPPNWKYESS 494
YYK +P NW+++SS
Sbjct: 125 YYKRIQRIPINWRFDSS 141
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+K + + + E I L KKGL PSQIG LRDS G+ V+ + G+ I++
Sbjct: 23 VKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAGRNIVK 70
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 108 bits (260), Expect = 7e-23
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +3
Query: 297 GLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPN 476
GLA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L ESRIH LARY KTK +LPP+
Sbjct: 59 GLALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTESRIHPLARYCKTKRMLPPS 118
Query: 477 WKYES 491
WKYES
Sbjct: 119 WKYES 123
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 244
LK T+DD+KEQIYKL KKGLTPSQIGV LRD+HG+A
Sbjct: 26 LKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHGLA 61
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 108 bits (260), Expect = 7e-23
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +3
Query: 300 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 479
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 480 K 482
K
Sbjct: 129 K 129
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 89.8 bits (213), Expect = 4e-17
Identities = 56/146 (38%), Positives = 77/146 (52%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
M RMHA +G S S P R+ VP P L ++ ++
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWV-QYTPEQVEQLVVELAKKGYQSAQIGLILRDTYG 59
Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
+P K+ S IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+E
Sbjct: 60 IPDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIE 119
Query: 420 SRIHRLARYYKTKSVLPPNWKYESST 497
S+I RL +YYK+K VLP +W+Y T
Sbjct: 120 SKIRRLVKYYKSKGVLPADWRYTPET 145
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 274
++ T + V++ + +L KKG +QIG++LRD++G+ V+ +TGKKI
Sbjct: 26 VQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDVKLITGKKI 71
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 83.4 bits (197), Expect = 3e-15
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = +3
Query: 282 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 461
I++ GLAP++PEDL +LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK K
Sbjct: 81 ILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKG 140
Query: 462 VLPPNWKYE 488
LP +W+Y+
Sbjct: 141 KLPKDWRYD 149
Score = 40.3 bits (90), Expect = 0.028
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 GAALPPQCPXP-GLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 253
G+ PP+ P L+ T +D++ + KL K+G + + IG +LRD +G+ V+
Sbjct: 13 GSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVK 64
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 81.8 bits (193), Expect = 9e-15
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRR-SVPYLX*N*LPTM*RNKF-TNLERRVSLPHKLV*C*GIH 233
MG+M++ GKGIS + +PYR+ S + L + K NL + +LP +
Sbjct: 1 MGKMYSKGKGISSTTVPYRKYSCEWKG---LTSQNLIKIIANLAKNNNLPPSKIGLVLRD 57
Query: 234 MELPK*DS*LAKRS-SXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 410
+L ++ + S I++ GL P +PEDL+YLIKKA ++ HL + D +++ L
Sbjct: 58 EKLVVDTRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLN 117
Query: 411 LVESRIHRLARYYKTKSVLPPNWKYESS 494
L+ES I+RL+RYYK LP NWKY S+
Sbjct: 118 LIESHIYRLSRYYKRIFRLPKNWKYISN 145
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 79.8 bits (188), Expect = 4e-14
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +3
Query: 261 LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 440
+ K ++ GL PD+P DL YL+K+A + KH+E N +D +K L+ S+IHRLA
Sbjct: 69 IGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLA 128
Query: 441 RYYKTKSVLPPNWKY 485
+YYK K VLP +WKY
Sbjct: 129 KYYKRKGVLPKDWKY 143
Score = 41.1 bits (92), Expect = 0.016
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 158 VKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHE 289
V+ +I +L K+G +P+ IG++LRD +G+ VR GK + + E
Sbjct: 35 VENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQDFLE 78
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 78.6 bits (185), Expect = 9e-14
Identities = 53/142 (37%), Positives = 71/142 (50%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
M R+HA +G S S YR S P + P K L P +
Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWV-DMSPEEVEKKVLELYNEGYEPSMIGMILRDRYG 59
Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
+P K+ I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E
Sbjct: 60 IPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIE 119
Query: 420 SRIHRLARYYKTKSVLPPNWKY 485
++I RL+ YYK K VLP +WKY
Sbjct: 120 AKIWRLSSYYKEKGVLPADWKY 141
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/50 (38%), Positives = 35/50 (70%)
Frame = +2
Query: 125 PXPGLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 274
P + ++ ++V++++ +L +G PS IG++LRD +G+ V+ VTGKKI
Sbjct: 22 PPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKI 71
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 76.2 bits (179), Expect = 5e-13
Identities = 47/141 (33%), Positives = 71/141 (50%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
M +MH+ GKG S S PY + P + + + + V P +
Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEY-G 59
Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
+ K L + + ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV
Sbjct: 60 IGKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVS 119
Query: 420 SRIHRLARYYKTKSVLPPNWK 482
SR++R+ARYYK K +P NWK
Sbjct: 120 SRMYRVARYYKRKMRIPGNWK 140
Score = 40.7 bits (91), Expect = 0.021
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRY 283
L + D++K + ++G KG+ IG LRD +G+ + V G+ I R+
Sbjct: 26 LTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITRF 74
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +3
Query: 267 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 446
K + IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E+++HRL Y
Sbjct: 68 KSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVY 127
Query: 447 YKTKSVLPPNWKYES 491
YK +P +WKY+S
Sbjct: 128 YKRIGRIPKDWKYKS 142
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 155 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHE 289
+V++ I K K+GL PSQIG LRD H + R +TGK + + E
Sbjct: 31 EVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQIME 75
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 267 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 446
K I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E+++HRL+ Y
Sbjct: 69 KTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVY 128
Query: 447 YKTKSVLPPNWKYES 491
YK +P WKY+S
Sbjct: 129 YKKIGRIPATWKYKS 143
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 155 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 274
+++E + K K GLTPSQIG+ LRD H + ++ +T K I
Sbjct: 32 EIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTI 71
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +3
Query: 261 LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 440
L KR ++ + PEDL L+++AVA+ +HL N +D +K L L E++I RL
Sbjct: 67 LGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLG 126
Query: 441 RYYKTKSVLPPNWKYE 488
YYK + L +W+Y+
Sbjct: 127 NYYKAEGRLDSDWRYK 142
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 149 ADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 274
A +++ I + K G++ +QIG +LRD H V VR V GK+I
Sbjct: 30 AKEIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRI 71
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 282 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 461
++K L D+PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK S
Sbjct: 74 VLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTS 133
Query: 462 VLPPNWKYE 488
LP +W E
Sbjct: 134 RLPQDWSLE 142
Score = 39.9 bits (89), Expect = 0.037
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 274
++ + D++KE I K+ K+G+T S IG+ LRD + + R V K+
Sbjct: 26 IQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKL 71
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 56.0 bits (129), Expect = 5e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +2
Query: 137 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 229
LKLT+D+VKEQIYKL KKGLTP QIGV+LRD
Sbjct: 239 LKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
Score = 38.7 bits (86), Expect = 0.086
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 51 AANMGRMHAPGKGISQSALPYRRSVP 128
AA GR+H PGKG+S+SAL Y SVP
Sbjct: 211 AAITGRIHVPGKGLSRSALLYHHSVP 236
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +3
Query: 267 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 446
K+ + I++ PDLPEDL L+++AV +R H++ N D +K L +S+I RL Y
Sbjct: 73 KKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDY 132
Query: 447 YKTKSV 464
Y+ V
Sbjct: 133 YRGDEV 138
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 51 AANMGRMHAPGKGISQSALPYRRSV 125
+A +GRMHAPGKG+SQSALPYRRSV
Sbjct: 441 SAIVGRMHAPGKGLSQSALPYRRSV 465
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 333 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 485
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_UPI0000E2253B Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 237
Score = 33.1 bits (72), Expect = 4.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 144 NFXPGXGHCGGKAAPTGRYPY--QERAYDPCLRLFTKSPI*QRQQEKP 7
+F PG CG + +P R P +ER +DP L T++P RQ+ +P
Sbjct: 173 SFQPGADGCGARGSPVPRVPRVPREREWDPALGR-TQAPRPGRQRTEP 219
>UniRef50_Q0AC16 Cluster: Putative uncharacterized protein; n=5;
Alkalilimnicola ehrlichei MLHE-1|Rep: Putative
uncharacterized protein - Alkalilimnicola ehrlichei
(strain MLHE-1)
Length = 1100
Score = 33.1 bits (72), Expect = 4.3
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 65 SYARSW*GYLPVGAALPPQCPXPGLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDS---H 235
S ++SW G + +A+P QCP P ++D + + L ++GL ++ + DS H
Sbjct: 143 STSQSWSGDHSMPSAVPTQCPEPARIHESNDHLDALQALYQRGLDKAEKAGYVVDSALVH 202
Query: 236 GVAQVRFVTGKKILRYH 286
G ++ R + + RYH
Sbjct: 203 GDSEARI--REALQRYH 217
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 33.1 bits (72), Expect = 4.3
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 333 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 482
L K + + +HL+ +KD+ +K L L+ + +L RY + K P W+
Sbjct: 212 LTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLRRKERGGPRWQ 261
>UniRef50_Q0BPT6 Cluster: Putative uncharacterized protein; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Putative
uncharacterized protein - Granulobacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1)
Length = 269
Score = 32.3 bits (70), Expect = 7.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 89 YLPVGAALPPQCPXPGLKLTADDVKEQIYKLGKKGLTPSQI-GVMLRDSHG 238
+LP L PQ P P + A+D+KE+I G G +I + SHG
Sbjct: 86 FLPKAGDLGPQSPVPPAQALAEDLKERIVPGGSSGRAEVKILDASIVSSHG 136
>UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3;
Alphaproteobacteria|Rep: 3-dehydroquinate synthase -
Parvularcula bermudensis HTCC2503
Length = 371
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 264 AKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 422
AKR ++ GL P P+D+ LI A R +++++K + + RL+L+E+
Sbjct: 290 AKRVERMIADSGL-PTRPQDIPGLITSAAEQRAFMQQDKKVEAGQLRLVLLEA 341
>UniRef50_Q8SUH1 Cluster: Similarity to KINESIN-LIKE PROTEIN A; n=1;
Encephalitozoon cuniculi|Rep: Similarity to KINESIN-LIKE
PROTEIN A - Encephalitozoon cuniculi
Length = 495
Score = 31.9 bits (69), Expect = 9.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -2
Query: 194 DPSFQVCKFVPLHRRQSISXQVXDTAAVRQRRLGDTLTRSVHTTHVCGFLLNRRSDNDNK 15
D S C +P+H D A R++R+GDT S + ++LN R N+
Sbjct: 317 DASIMDCSSIPIHDISGAISSFQDGA--RKKRVGDTSCNSKSSRSHAVYILNVRMRNETL 374
Query: 14 RNQK 3
+ Q+
Sbjct: 375 KQQR 378
>UniRef50_Q9HXW0 Cluster: UPF0341 protein PA3680; n=34;
Proteobacteria|Rep: UPF0341 protein PA3680 - Pseudomonas
aeruginosa
Length = 261
Score = 31.9 bits (69), Expect = 9.8
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 134 GLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 265
GL L ADD E ++G++GL Q+G DS G +V FV G
Sbjct: 30 GLPLAADDEAEFAVQVGEQGLQVLQLGA---DSPGPVRVDFVEG 70
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,309,851
Number of Sequences: 1657284
Number of extensions: 9637405
Number of successful extensions: 24034
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24031
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -