Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O04
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   162   8e-42
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   1.6  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   1.6  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   1.6  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   1.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   1.6  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   1.6  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.6  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   8.6  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  162 bits (393), Expect = 8e-42
 Identities = 86/146 (58%), Positives = 104/146 (71%)
 Frame = +3

Query: 60  MGRMHAPGKGISQSALPYRRSVPYLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHME 239
           MGRMHAPGKGIS+SALPYRRSVP         + + +   L ++   P ++         
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDV-KEQIKKLGKKGMTPSQIGIILRDSHG 59

Query: 240 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 419
           + +       +   IMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+E
Sbjct: 60  VAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIE 119

Query: 420 SRIHRLARYYKTKSVLPPNWKYESST 497
           SRIHRLARYYK K+VLPPNWKYESST
Sbjct: 120 SRIHRLARYYKIKAVLPPNWKYESST 145



 Score = 87.8 bits (208), Expect = 2e-19
 Identities = 43/60 (71%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
 Frame = +2

Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
           +ALP +   P  LKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGVAQVRFV G K+LR
Sbjct: 14  SALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGVAQVRFVNGNKVLR 73


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 166 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 279
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 332 PDQESCCNEETLG 370
           P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 99   TGRYPYQERAYDPCLRLF 46
            TG Y Y+ R YDP +  F
Sbjct: 2679 TGLYNYRARLYDPDIGRF 2696


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 99   TGRYPYQERAYDPCLRLF 46
            TG Y Y+ R YDP +  F
Sbjct: 2689 TGLYNYRARLYDPDIGRF 2706


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 137 LKLTADDVKEQIYKL 181
           LKL ADDVK Q+  L
Sbjct: 95  LKLAADDVKGQVESL 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,349
Number of Sequences: 2352
Number of extensions: 9569
Number of successful extensions: 39
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)