Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_O04
(543 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal prot... 169 2e-42
X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal prot... 169 2e-42
AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p pro... 169 2e-42
AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-P... 169 2e-42
AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-P... 169 2e-42
Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal prot... 167 6e-42
BT003433-1|AAO39436.1| 634|Drosophila melanogaster SD04308p pro... 28 7.2
AF435838-1|AAL30823.1| 633|Drosophila melanogaster suppressor o... 28 7.2
AE014134-2912|AAF53652.2| 633|Drosophila melanogaster CG15154-P... 28 7.2
AE014134-2911|AAN11183.1| 720|Drosophila melanogaster CG15154-P... 28 7.2
>X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 169 bits (411), Expect = 2e-42
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + + L ++ P K+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDV--KEQIKKLGKKGLTPSKIGIILRDSH 58
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 59 GVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
>X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 169 bits (411), Expect = 2e-42
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + + L ++ P K+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDV--KEQIKKLGKKGLTPSKIGIILRDSH 58
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 59 GVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
>AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p
protein.
Length = 151
Score = 169 bits (411), Expect = 2e-42
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + + L ++ P K+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDV--KEQIKKLGKKGLTPSKIGIILRDSH 58
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 59 GVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
>AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-PB,
isoform B protein.
Length = 151
Score = 169 bits (411), Expect = 2e-42
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + + L ++ P K+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDV--KEQIKKLGKKGLTPSKIGIILRDSH 58
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 59 GVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
>AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-PA,
isoform A protein.
Length = 151
Score = 169 bits (411), Expect = 2e-42
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + + L ++ P K+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDV--KEQIKKLGKKGLTPSKIGIILRDSH 58
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 59 GVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
>Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal protein
S17 protein.
Length = 151
Score = 167 bits (407), Expect = 6e-42
Identities = 92/147 (62%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 60 MGRMHAPGKGISQSALPYRRSVP-YLX*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHM 236
MGRMHAPGKGISQSALPYRR+VP +L N + K E SL ++ +
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGV 60
Query: 237 ELPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 416
+ + + IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILV
Sbjct: 61 AQVRFVN--GNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILV 118
Query: 417 ESRIHRLARYYKTKSVLPPNWKYESST 497
ESRIHRLARYYKTKSVLPPNWKYESST
Sbjct: 119 ESRIHRLARYYKTKSVLPPNWKYESST 145
Score = 74.5 bits (175), Expect = 8e-14
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 AALPPQCPXPG-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 280
+ALP + P LKL ADDVKEQI K G++G QIG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGVAQVRFVNGNKILR 73
>BT003433-1|AAO39436.1| 634|Drosophila melanogaster SD04308p
protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 185 FQVCKFVPLHRRQSISXQVXDTAAV 111
F+ C +PLHRRQ+ S Q A +
Sbjct: 562 FEPCLTIPLHRRQTFSLQQLSRATI 586
>AF435838-1|AAL30823.1| 633|Drosophila melanogaster suppressor of
cytokine signalingSOCS36E protein.
Length = 633
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 185 FQVCKFVPLHRRQSISXQVXDTAAV 111
F+ C +PLHRRQ+ S Q A +
Sbjct: 561 FEPCLTIPLHRRQTFSLQQLSRATI 585
>AE014134-2912|AAF53652.2| 633|Drosophila melanogaster CG15154-PA,
isoform A protein.
Length = 633
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 185 FQVCKFVPLHRRQSISXQVXDTAAV 111
F+ C +PLHRRQ+ S Q A +
Sbjct: 561 FEPCLTIPLHRRQTFSLQQLSRATI 585
>AE014134-2911|AAN11183.1| 720|Drosophila melanogaster CG15154-PB,
isoform B protein.
Length = 720
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 185 FQVCKFVPLHRRQSISXQVXDTAAV 111
F+ C +PLHRRQ+ S Q A +
Sbjct: 561 FEPCLTIPLHRRQTFSLQQLSRATI 585
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,964,646
Number of Sequences: 53049
Number of extensions: 455554
Number of successful extensions: 1095
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -