Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_O01
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.027
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    28   0.063
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    26   0.19 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.44 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.77 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.027
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -3

Query: 385 YILLPSFFWCCFLYFTILILSICVTGSFPSAFGFLFRYNVL----FINFSFYRLSFRIFN 218
           ++L   +F+C F+ FT+ +L +     F  AF  +F  ++L    FI F+ + L     +
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF-IIFTMHLLFCCAFIFFNMHLLFLLCLD 200

Query: 217 YF 212
           YF
Sbjct: 201 YF 202



 Score = 29.1 bits (62), Expect = 0.027
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = -3

Query: 445 CHFIFN*GFISRXIFHRRFLYILLPSFFWCCFLYFTILILSICVTGSFPSAFGFL----- 281
           C + F   FI   IF    L++L    F+C F+ FT+ +L  C    F     FL     
Sbjct: 145 CIYYFYCAFI---IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201

Query: 280 FRYNVLFINFSFYRLS-FRIF 221
           F  ++LF+   +Y  S F IF
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIF 222



 Score = 23.4 bits (48), Expect = 1.3
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = -3

Query: 403 FHRRFLYILLPSFFWCCFLYFTILILSICVTGSFPSAFGFLFRYNVLFINFSFYRLSFRI 224
           F    L++    +F+  F+ FTI +L  CV       + F +     FI F+ + L    
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYY----AFILFTVHLLLLVC 257

Query: 223 FNYFCF 206
             YF +
Sbjct: 258 IYYFYY 263


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.063
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 352 FLYFTILILSICVTGSFPSAFGFLFRYNVLFINFSFYRLSFRIFNYF 212
           F +  ILIL+ C+T S  S +  +  Y     NF+   + F +FN F
Sbjct: 224 FGWTLILILAKCITSSLSSLYTCIAGYE-FNANFTISYILFALFNTF 269


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +2

Query: 254 VDEKNIVSEKKTKRGRKAAGDTNG-----QDENGKIEETAPKKGRKKNVEE 391
           V   ++   K++KR ++  GDTNG      D+N  +E +  +  +  + +E
Sbjct: 66  VQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDE 116


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 224 DPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDENGKIEETAPKKGRKKNVEE 391
           + E    EAE ++K    E K K   K       +DE+ K E+   KK  K+   E
Sbjct: 220 EKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 332 ENGKIEETAPKKGRKKNVEEPPVENXSTDEPSVEDEVAVSEENNPSED 475
           E  + +E +  +  ++  EE   E+   D+P +ED     +E+   ED
Sbjct: 216 EKEREKELSDDEAEEEKKEEEG-EDKDKDKPKIEDVGEDEDEDTKKED 262


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 332 ENGKIEETAPKKGRKKNVEEPPVENXSTDEPSVEDEVAVSEENNPSEDGSETNGHIEEEQ 511
           ++ + E    K+ ++  ++E  +     ++ SV+ E+ + ++     DG + +G  EEE 
Sbjct: 35  DDARFETLVVKQTKQSVLDEARLR---ANDSSVDPEIDIEDKPAQKIDGEDDSGLTEEEV 91

Query: 512 VPS 520
           V S
Sbjct: 92  VLS 94


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +2

Query: 317 TNGQDENGKIEETAPKKGRKKNVEEPPVENXSTDEPSVEDEVAVSEENNPSEDGSETN 490
           ++G D+ G  +E    K      +E       T+E S   ++  SEE +     S  N
Sbjct: 6   SSGGDDLGSTDEVKVFKDEGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKN 63


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 292 FGFLFRYNVLFINFSFYRLSF 230
           F F ++YN  + N++ Y+  F
Sbjct: 211 FNFNYQYNQAYSNYNNYQEGF 231


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 292 FGFLFRYNVLFINFSFYRLSF 230
           F F ++YN  + N++ Y+  F
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGF 251


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 446  VSEENNPSEDGSETNGHIEEEQVPSG 523
            V+E    S + SET   I  E+VP G
Sbjct: 972  VAENEIGSSEPSETVTIITAEEVPGG 997


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 454 LRHCHFIFN 428
           L HCHF+F+
Sbjct: 668 LFHCHFLFH 676


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 454 LRHCHFIFN 428
           L HCHF+F+
Sbjct: 668 LFHCHFLFH 676


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,039
Number of Sequences: 336
Number of extensions: 1706
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)