Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_N24
(653 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 22 3.8
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 22 3.8
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 22 3.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 6.7
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 6.7
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.9
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 8.9
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 8.9
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 1 EIIHLIYSRLHPLLIVSDFILAYS 72
++IH+ Y+ + LL+ DF+ Y+
Sbjct: 111 QLIHVYYTVVFTLLLGVDFVKEYA 134
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 1 EIIHLIYSRLHPLLIVSDFILAYS 72
++IH+ Y+ + LL+ DF+ Y+
Sbjct: 111 QLIHVYYTVVFTLLLGVDFVKEYA 134
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 1 EIIHLIYSRLHPLLIVSDFILAYS 72
++IH+ Y+ + LL+ DF+ Y+
Sbjct: 431 QLIHVYYTVVFTLLLGVDFVKEYA 454
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 143 TFFVKSWIPSVTYFWNLITAC 205
TF +K ++ YF+NLI C
Sbjct: 202 TFTIKIRRRTLYYFFNLIVPC 222
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 143 TFFVKSWIPSVTYFWNLITAC 205
TF +K ++ YF+NLI C
Sbjct: 202 TFTIKIRRRTLYYFFNLIVPC 222
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 143 TFFVKSWIPSVTYFWNLITAC 205
TF +K ++ YF+NLI C
Sbjct: 202 TFTIKIRRRTLYYFFNLIVPC 222
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 143 TFFVKSWIPSVTYFWNLITAC 205
TF +K ++ YF+NLI C
Sbjct: 202 TFTIKIRRRTLYYFFNLIVPC 222
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 143 TFFVKSWIPSVTYFWNLITAC 205
TF +K ++ YF+NLI C
Sbjct: 202 TFTIKIRRRTLYYFFNLIVPC 222
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 492 NQCSIFKDAWLTCNNN 445
N C + +D W NNN
Sbjct: 95 NSCILNQDKWRLLNNN 110
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 325 PYLQSFFHSTVPQ 287
PYL FHS P+
Sbjct: 112 PYLSPLFHSAAPR 124
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 513 FKWSDMLNQCSIF 475
+KWSD+ ++C F
Sbjct: 35 WKWSDIADECERF 47
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 513 FKWSDMLNQCSIF 475
+KWSD+ ++C F
Sbjct: 36 WKWSDIADECERF 48
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 371 WIYYLFILLNNKIMTIFHSIVN 436
W+++L L N + F IVN
Sbjct: 243 WLFFLANFLTNLLFWEFDQIVN 264
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,263
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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