Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N24
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory recep...    29   3.8  
Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical...    28   6.7  

>Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical
           protein C55A1.12 protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 492 STYLTI*IKYLTACATNTTLHISGEISHLNTVNLKLG 602
           +T L I I YLT    N TL  S   + LN++NLK G
Sbjct: 270 TTPLIIQISYLTCTKRNITLMFSSFTTVLNSLNLKYG 306


>U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical
           protein C03B1.1 protein.
          Length = 297

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 508 MVRYVESMFNFQRCMVNM*QQCLRIYNGMKYGH 410
           M+ YV+  FN    M+ M Q CL +YN    G+
Sbjct: 97  MINYVDQNFNLIGGMIKMHQYCLSVYNKSGSGY 129


>Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical
           protein C47G2.4 protein.
          Length = 644

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 338 NPIVK*STFIYWIYYL---FILLNNKIMTIFHSIVNPQTLLLH 457
           NPIV  STFI W + L   F+L  +  +T FH   N +  +L+
Sbjct: 31  NPIVTISTFIGWYFSLIIVFVLPLDVAITFFHKCENDRQRILN 73


>U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory receptor
           family protein 5 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 314 VLLSQHRASEAKIKICLAVRLFCTC 240
           ++L+QH +S     IC+   LFCTC
Sbjct: 287 MMLNQHLSSFTDFLICMPFILFCTC 311


>Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical
           protein C09G9.3 protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 566 FTTNMQCSIGCTSCQIFYLNGQIC*INVQFSKMHG 462
           F T +    G    QI+YLNG +  + V+F+  +G
Sbjct: 136 FDTTLDLRAGIFGNQIYYLNGDVDTVTVEFTCQNG 170


>AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical
           protein Y9C9A.13 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 74  LFSKINVQVCFLRLQ*YITIKPNTFFVKSWIPSVTYFWNLITACSISLSCL 226
           +F   N +  F ++Q    I+ +   VK  + S+  F N    CSI L C+
Sbjct: 319 IFLLRNFETLFYKIQEISKIESSFSLVKEILKSIEVFSNDSIICSIGLKCI 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,554,572
Number of Sequences: 27780
Number of extensions: 306524
Number of successful extensions: 664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)