Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N23
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.64 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   1.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    24   1.5  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    24   1.5  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 535 PANTSWESGASALEHALKLESDVTNSI 615
           P   SW S  + +  A KL+ ++ NSI
Sbjct: 151 PTEASWHSPEAHISVAQKLQKEIPNSI 177


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTRRGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP    R   +P + P + R
Sbjct: 93  ESEAEPGNNRPVYIPQPRPP-HPRLRREPEAEPGNNR 128



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTRRGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP    R   +P + P + R
Sbjct: 119 EPEAEPGNNRPVYIPQPRPP-HPRLRREPEAEPGNNR 154


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 176 EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 213



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 204 EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 241



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 232 EPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNR 269


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 37  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 74



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 65  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 102



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 93  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 130


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 36  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 73



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 64  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 101



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 92  EPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNR 129



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 EGQADRLRNRPHHVQGPRPTR-RGRAAHQPSSTPSSWR 595
           E +A+   NRP ++  PRP   R R   +P + P + R
Sbjct: 120 EPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNR 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,030
Number of Sequences: 438
Number of extensions: 2986
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)