Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_N23
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 52 3e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 49 2e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 47 1e-05
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 47 1e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.001
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 30 1.5
At5g46570.1 68418.m05734 protein kinase family protein contains ... 29 2.7
At4g25520.1 68417.m03680 transcriptional co-regulator family pro... 29 2.7
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 2.7
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP... 29 2.7
At1g79060.1 68414.m09218 expressed protein 29 3.6
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 6.2
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 6.2
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 306 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 485
C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 486 RG 491
RG
Sbjct: 157 RG 158
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +3
Query: 306 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 485
C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y
Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154
Query: 486 RG 491
RG
Sbjct: 155 RG 156
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +3
Query: 327 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 491
QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG
Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 315 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 491
++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 330 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 476
I E S Y A+ AY D V GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 511 PTSSRTGPPANTSWESGASALEHALKLESDVTNSIREVI 627
PTSS P +TS +S + ALKL V N + E +
Sbjct: 411 PTSSSEATPRDTSKQSSLDLMTQALKLHPTVLNKLVEKV 449
>At5g46570.1 68418.m05734 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 489
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -2
Query: 647 KLLSQVLM---TSRMLLVTSLSSL-RACSRADAPLSHDVLAGGPVRDEVG 510
++ S VLM + ++L T LS L +AC++ D HD+L RDE G
Sbjct: 315 EVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEG 364
>At4g25520.1 68417.m03680 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 748
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 403 APASRSYSSMLRLKNASTRPSSLTTCS*GAS*QAP*PTSSRTGPPANTS 549
A A +Y SML +NA P+S T G S Q P P S+++ P+++S
Sbjct: 558 AAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPNSNQS--PSSSS 604
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 407 RLREAILRCCD*RTRARDQAH*LPAHEGQADRLRNRPHHVQGPRPTRR 550
RL EAI R T + D L HE Q + + H G TR+
Sbjct: 368 RLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTRK 415
>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
/ pyrophosphate phospho-hydrolase / PPase nearly
identical to SP|P21216 Soluble inorganic pyrophosphatase
(EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
{Arabidopsis thaliana}
Length = 218
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 287 PLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLNFSYNHRFFDDIQKN 138
P+I G+ D + C D KE PH + RFF+D +KN
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPH-RLAEIRRFFEDYKKN 181
>At1g79060.1 68414.m09218 expressed protein
Length = 396
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 308 ASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLN 180
ASLL PL+ D D V++ S S S+ S E+ P L+
Sbjct: 175 ASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLS 217
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 556 SGASALEHALKLESDVTNSIREVIKTCESSFN 651
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 556 SGASALEHALKLESDVTNSIREVIKTCESSFN 651
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,277
Number of Sequences: 28952
Number of extensions: 242908
Number of successful extensions: 643
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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