Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N21
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0437 + 3390099-3392570                                           32   0.35 
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128...    31   0.61 
11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458     28   5.6  
09_03_0110 + 12432562-12432801,12432811-12433419                       28   5.6  
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833...    28   7.5  
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014...    28   7.5  
06_03_0381 - 20106714-20107088,20107177-20107594,20107721-201079...    27   9.9  

>03_01_0437 + 3390099-3392570
          Length = 823

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +2

Query: 491 SWCWFAKMNRNQRRYELISXRIDGLLERRETRFLTGDTMCCFDCELM 631
           +WCWF K N  Q   E  S  ID   ER          MCC   +++
Sbjct: 412 AWCWFEKFN-YQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKML 457


>11_06_0062 +
           19709801-19710832,19712383-19712568,19712661-19712867,
           19712940-19713078,19713172-19713380,19713520-19714134
          Length = 795

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
 Frame = +1

Query: 352 LIDNGLAILENE-KIERHIMKSVPGGHNLFVQDKEVASLIENLYSKLKLVLVRKDEQKSA 528
           L++NG  +   + K+ + +   +   H+L  ++K    ++E   S L  +   +DE  SA
Sbjct: 675 LVENGFNVQSLQCKLNKALQFKLDRTHSLAYREKLKEQVLEK-QSSLSRIGASRDENDSA 733

Query: 529 A--LRAHLGTHRWTSRTQGDQVPNGRHYVLFRLRAD 630
              L   LG HRW  +    ++ +     L RL+A+
Sbjct: 734 MAKLEMELGRHRWDGQMMSKKMED-EEAELSRLKAE 768


>11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458
          Length = 619

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 432 VVSPWHGLHDVTFDL--FVLKYRQPIIDQYGRVCRFEVGAEIWGRLLHVH 289
           + S +   HDV   L  +       +I + G+ C +E+ AE+WG L+ VH
Sbjct: 506 LTSKFQKAHDVANFLSEYCALLANALIKKEGQACLWEILAEVWGHLI-VH 554


>09_03_0110 + 12432562-12432801,12432811-12433419
          Length = 282

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
 Frame = -2

Query: 200 RLPSIVDAFIIS--SIS-GTSPLAVPFSAISSDIVI 102
           R+PS+   ++++   IS G +PLA+P SA SS +VI
Sbjct: 124 RIPSVPTFYVVALTGISVGGAPLAIPPSAFSSGMVI 159


>06_03_1318 - 29282562-29282566,29282727-29282810,29282913-29283380,
            29283735-29283917,29284362-29284467,29284627-29284651,
            29284736-29284855,29284920-29284997,29285646-29285774,
            29285976-29285989,29286168-29287944,29288344-29288489,
            29288921-29291029
          Length = 1747

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -1

Query: 417  HGL-HDVTFDLFVLKYRQPIIDQYGRVCRFEVGAEIWGRL--LHVHCCH 280
            HG+ H + F    +  +  +ID YG+ C F+    I+  +  + + CC+
Sbjct: 1020 HGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCN 1068


>03_02_0712 -
           10600147-10600196,10600257-10600378,10600993-10601489,
           10601663-10601851,10601936-10602099,10602193-10602446,
           10602535-10602691,10602830-10602995,10603121-10603227,
           10603305-10603478,10603594-10603689,10603781-10603862,
           10603948-10604058,10604253-10604309,10604638-10604709,
           10604799-10605041,10605195-10605341,10605381-10605616,
           10605745-10605865
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 79  LLNSSVS*ITMSDEIAENGTANGDVPEIELIIKASTID 192
           + N  V  + ++DEI  N     +VP+  L+  AST+D
Sbjct: 525 IYNEQVRDLLVNDEIRNNSQNGLNVPDASLVCVASTMD 562


>06_03_0381 -
           20106714-20107088,20107177-20107594,20107721-20107970,
           20108109-20108169,20108346-20108422,20108557-20109007
          Length = 543

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 402 HHEVRARGTQPIRAGQGGRVSNREPVFKTEAGAGS 506
           HH +R RG     AG G   ++ +PV  +EA  GS
Sbjct: 385 HHHLRWRGGA---AGSGNTTASSDPVVASEAALGS 416


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,250,574
Number of Sequences: 37544
Number of extensions: 396729
Number of successful extensions: 1045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)